Part of scaffold_0 (Scaffold)

For more information consult the page for scaffold_0 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

USP49 ENSTTRG00000009418 (Bottlenosed dolphin)

Gene Details

ubiquitin specific peptidase 49

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008921, Bottlenosed dolphin)

Protein Percentage 98.81%
cDNA percentage 98.73%
Ka/Ks Ratio 0.13442 (Ka = 0.0044, Ks = 0.033)

BT.31964 ENSBTAG00000008981 (Cow)

Gene Details

Ubiquitin carboxyl-terminal hydrolase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011820, Cow)

Protein Percentage 96.96%
cDNA percentage 96.72%
Ka/Ks Ratio 0.12008 (Ka = 0.0124, Ks = 0.1031)

USP49  (Minke Whale)

Gene Details

ubiquitin specific peptidase 49

External Links

Gene match (Identifier: BACU017993, Minke Whale)

Protein Percentage 98.59%
cDNA percentage 99.3%
Ka/Ks Ratio 0.6591 (Ka = 0.0055, Ks = 0.0084)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1284 bp    Location:5739905..5750735   Strand:+
>bmy_00091
ATGGATAGATGCAAACATGTAGGGCGGTTGCGGCTAGCCCAGGACCACTCCATCCTGAACCCACAGAAGTGGTGCTGCCGGGAGTGCGCCACCACCGAGTCCGTGTGGGCTTGTCTCAAGTGCTCGCACGTGGCCTGCGGCCGCTACATCGAAGATCACGCCCTCAAACACTTCGAAAAKACTGGACACCCACTAGCCATGGAGGTCCGGGATCTCTACGTGTTCTGCTACCTGTGCAAGGACTACGTGCTCAACGACAACCCGGAAGGGGACCTCAAGCTGCTGAGAAGCTCCCTCTTGGCGGTCAGGGGCCAGACGCAGGACCCGCCGCTGAGGCGCGGGCGGATGCTGCGGTCCATGGCCTCGGGCGAAGACGCCGTCCCGCCGCAGCGCGCTCCTCAGGGACAGCCGCAGATGCTCACGGCTCTGTGGTATCGGCGCCAGCACCTGCTGGCCCGGACGCTGCGGCTCTGGTTCGAGAAGACCTCGCGGGGCCAGGCCAAGCTGGAGCAGCGGCGGCGGCAGGAGGCGCTGGAGCGCAAGAAGGAGGCAGCGCGGCAGCGGCGGCGCGAGGTCACATGTGTATCATGCAATTACAAATCCAATACCATCGAGCCCTTTTGGGATCTGTCCCTGGAATTCCCTGAACGCTATCACTGCATAGAAAAGGGGTTTATCCCTTTGAATCAGACTCAGTGCCTGCTCACTGAGATGCTGGCCAAGTTCACAGAGACAGAGGCCCTGGAAGGGAGAATCTACGCTTGTGACCAATGTAACAGCAAACGACGAAAATCCAATCCAAAACCCCTTGTTCTGAGTGAAGCTAGAAAGCAGTTAATGATCTACAGACTACCTCAGGTCCTCCGGCTGCACCTTAAAAGATTCAGGTGGTCTGGCCGTAGTCACCGAGAGAAGATTGGGGTCCATGTCGTCTTTGACCAGGTATTAACCATGGAACCTTACTGCTGCAGGGACATGCTCTCCTCTCTTGACAAAGAAACCTTTGCCTATGATCTCTCCGCAGTGGTCATGCATCACGGGAAAGGGTTTGGCTCAGGACACTACACAGCCTATTGCTACAACACAGAGGGAGGTTTTTGGGTCCACTGCAATGACTCAAAGCTGAATGTATGCAGTGTCGAGGAAGTGTGCAAAACTCAAGCCTACATCCTTTTTTACACTCAAAGAACAGTTCAGGGCAATGCAAGAATCTCAGAAACCCAACTCCAAACTCAGGTGCAGTCCAGCAACAACGATGAGGGCAGACCACGGACCTTCCCCTGA

Related Sequences

bmy_00091T0 Protein

Length: 428 aa      View alignments
>bmy_00091T0
MDRCKHVGRLRLAQDHSILNPQKWCCRECATTESVWACLKCSHVACGRYIEDHALKHFEXTGHPLAMEVRDLYVFCYLCKDYVLNDNPEGDLKLLRSSLLAVRGQTQDPPLRRGRMLRSMASGEDAVPPQRAPQGQPQMLTALWYRRQHLLARTLRLWFEKTSRGQAKLEQRRRQEALERKKEAARQRRREVTCVSCNYKSNTIEPFWDLSLEFPERYHCIEKGFIPLNQTQCLLTEMLAKFTETEALEGRIYACDQCNSKRRKSNPKPLVLSEARKQLMIYRLPQVLRLHLKRFRWSGRSHREKIGVHVVFDQVLTMEPYCCRDMLSSLDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAYILFYTQRTVQGNARISETQLQTQVQSSNNDEGRPRTFP*