Sequence detailsbmy_00094 (Coding sequence)

Part of scaffold_0 (SequenceType object (1))

For more information consult the page for scaffold_0 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PGCENSTTRG00000009383 (Bottlenosed dolphin)

Gene Details

progastricsin (pepsinogen C)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008893, Bottlenosed dolphin)

Protein Percentage 67.1%
cDNA percentage 71.38%
Ka/Ks Ratio 0.39162 (Ka = 0.0662, Ks = 0.1689)

PGCENSBTAG00000003818 (Cow)

Gene Details

gastricsin precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000004973, Cow)

Protein Percentage 83.77%
cDNA percentage 88.53%
Ka/Ks Ratio 0.19301 (Ka = 0.0827, Ks = 0.4282)

Additional orthologs identified in other species via the OPTIC pipeline.

PGC (Human)   Pgc (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1197 bp    Location:5780607..5800912   Strand:+
Raw sequence 
>bmy_00094
ATGCCCCCCAACAACTCAATAAAGACCCTGCCCTACCCCCCATGGGGCCCCCCGCCTGCCCCAGAGGGCAAGCCCTTCTGCAGAGTCCCCGTGAAGAAATTAAAGTCCATCCGTGAGACCATGAAGGAGAAGGGGATACTGGAGGACTTCCTGAGGACCCACAAGTACGACCCCGCCCAGAAGTACCGCTTTAATGACTTCAGCGTGGCCTCCGAGCCCATGGACTACATGGACGCTGCCTACTTTGGTGAGATCAGCATCGGGACCCCACCACAGAACTTCCTGGTCCTTTTTGATACTGGCTCCTCCAACCTGTGGGTGCCCTCTGTCTACTGCCAGAGCCAGGCCTGCACCAGCCACGCCCGCTTCAACCCCAGCCTGTCCTCCACCTACTCCAGCAATGGGCAGATCTTCTCCCTGCAGTATGGCAGTGGCAGCCTCACCGGCTTCTTCGGCTATGACACTCTGACAGTCCAGGGCATCAAGGTCCCCAACCAGGAGTTCGGCCTGAGCGAGAACGAGCCGGGTACCAATTTCCTCTATGCGAAGTTCGATGGCATCATGGGCATGGCCTACCCTGCCCTGTCCATGGGCAGGGCCACCACCGCCCTGCAGGGCATGCTGCAGGAGGGTGCCCTCACCAGCCCAGTCTTCAGCTTCTACCTCAGCAGCCAGCAGGGCTCTCAGGACGGGGGAGCAGTCATCTTCGGGGGTGTGGACAGCAGCCTGTACACGGGGCAGATCTATTGGGCCCCCGTCACCCAGGAGCTGTACTGGCAGATTGGCATCGAGGAGTTCCTCATTGGTGACCAGGCCACGGGCTGGTGCTCCCAGGGCTGCCAGGCCATCGTGGACACTGGCACGTCTCTGCTCACCGTGCCCCAGCAGTTCATGAGCTCCCTTCTGCAGGCCACAGGGGCCAAGGAGGACCAGTATGGACAGTTTCTCGTGGACTGTAGCAACATCCAGAGCCTGCCCACCCTCACGTTCGTCATCAATGGTGTGCAGTTCCCTCTGCCACCCGCTTCCTACATCCTCAATAACGACGACAGCTTTTGCATGGTGGGGGTCGAGGCCACCTACCTGCCCTCCCAGAACGGCCAGCCCCTGTGGATCCTTGGGGACGTCTTCCTCAGGTCCTACTACTCCGTCTATGACTTGGGCAACAACAGGGTGGGCTTTGCCACCGCCGCCTAG

Related Sequences

bmy_00094T0 SequenceType object (3)

Length: 399 aa      View alignments
>bmy_00094T0
MPPNNSIKTLPYPPWGPPPAPEGKPFCRVPVKKLKSIRETMKEKGILEDFLRTHKYDPAQKYRFNDFSVASEPMDYMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSHARFNPSLSSTYSSNGQIFSLQYGSGSLTGFFGYDTLTVQGIKVPNQEFGLSENEPGTNFLYAKFDGIMGMAYPALSMGRATTALQGMLQEGALTSPVFSFYLSSQQGSQDGGAVIFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGDQATGWCSQGCQAIVDTGTSLLTVPQQFMSSLLQATGAKEDQYGQFLVDCSNIQSLPTLTFVINGVQFPLPPASYILNNDDSFCMVGVEATYLPSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA*