Sequence detailsbmy_00095 (Coding sequence)

Part of scaffold_0 (SequenceType object (1))

For more information consult the page for scaffold_0 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TFEBENSTTRG00000016385 (Bottlenosed dolphin)

Gene Details

transcription factor EB

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000015529, Bottlenosed dolphin)

Protein Percentage 99.66%
cDNA percentage 98.87%
Ka/Ks Ratio 0.02374 (Ka = 0.0014, Ks = 0.0586)

TFEBENSBTAG00000012384 (Cow)

Gene Details

transcription factor EB

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000035926, Cow)

Protein Percentage 97.69%
cDNA percentage 95.17%
Ka/Ks Ratio 0.03467 (Ka = 0.0096, Ks = 0.2762)

Additional orthologs identified in other species via the OPTIC pipeline.

TFEB (Human)   Tfeb (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1431 bp    Location:5843510..5850027   Strand:+
Raw sequence 
>bmy_00095
ATGGCGTCACGCATCGGGCTCCGCATGCAGCTCATGCGGGAGCAGGCGCAGCAGGAGGAGCAGCGGGAGCGCATGCAGCAGCAGGCCGTCATGCATTACATGCAGCAGCAGCAGCAGCAGCAGCAGCTGGGGGCGCCGCCCACCCCCGCCATCAACACCCCCGTCCACTTCCAGTCTCCGCCACCTGTGCCCGGGGAGGTGCTGAAGGTGCAGTCCTACCTGGAGAACCCCACCTCCTACCACCTGCAGCAGTCCCGGGACCAGAAGGTGCGGGAGTACCTGTCTGAGACCTACGGGAACAAGTTTGCTGCCCACATCAGCCCTGCTCAGGGCTCCCCAAAGCCCCTGCCAGCCGCCTCCCCGGGCGTGCGGGCCGGACACGTGTTGTCGTCCTCAGCCGGCAACAGTGCTCCCAACAGCCCCATGGCCATGCTGCACATCGGCTCCAACCCTGAGCGGGAGTTTGATGTCATCGACAACATTATGTGTCTGGACGATGTCCTGGGCTTCATCAATCCAGAAACTCAGATTCCCAATACGCTGCCCCTGTCCAGCAGTCACCTAAATGTGTACAGTGGAGACCCCCAGGTCACCACCTCCCTGGTGGGCGTCACCAGCAGCTCCTGCCCAGCCGACCTGACCCAGAAGCGAGAGCTTACAGATGCTGAGAGCCGGGCCCTGGCCAAGGAGCGACAGAAGAAAGACAATCACAACCTCATTGAAAGGAGACGGAGGTTCAACATCAATGACCGCATCAAGGAGCTGGGAATGCTGATCCCCAAGGCCAACGACTTGGATGTGCGCTGGAACAAGGGCACCATCCTCAAGGCCTCTGTTGATTACATCCGGAGGATGCAGAAGGACCTGCAGAAGTCCCGGGAGCTGGAGAACCACTCTCGGCGCCTGGAGATGACCAACAAGCAGCTCTGGCTCCGCATCCAGGAGCTGGAGATGCAGGCTCGCGTGCACGGCCTCCCCACCACCTCGCCCTCGGGCATGAACATGGCCGAGCTGGCCCAGCAGGTGGTGAAGCAGGAGCTACCCAGCGAGGAGGGTCCGGGGGAGGCCCTGCTGCTGGGGGCCGAGGTCCCCGACCCTGAGCCACTGCCGGCTCTGCCCCCCCAGGCCCAGCTACCCCCGCCAGCCCAGCCAGCCCAGCCACCGTCCCCATTCCACCACCTGGACTTCAGCCACAGCCTGAGCTTTGGGGGTGGGGGCAACGAAGGGCCCCCGGGCTACCCCGAACCTCTGGGGCCAGAGCATGGCTCCCCGTTCCCCAACCTGTCCAAGAAGGATCTGGACCTCATGCTCCTGGACGACTCACTGCTACCACTGGCCTCCGACCCCCTCTTCTCCACTATGTCCCCCGAGGCCTCCAAAGCCAGCAGCCGCAGGAGCAGCTTCAGCATGGAGGAGGGCGACGTGCTGTGA

Related Sequences

bmy_00095T0 SequenceType object (3)

Length: 477 aa      View alignments
>bmy_00095T0
MASRIGLRMQLMREQAQQEEQRERMQQQAVMHYMQQQQQQQQLGAPPTPAINTPVHFQSPPPVPGEVLKVQSYLENPTSYHLQQSRDQKVREYLSETYGNKFAAHISPAQGSPKPLPAASPGVRAGHVLSSSAGNSAPNSPMAMLHIGSNPEREFDVIDNIMCLDDVLGFINPETQIPNTLPLSSSHLNVYSGDPQVTTSLVGVTSSSCPADLTQKRELTDAESRALAKERQKKDNHNLIERRRRFNINDRIKELGMLIPKANDLDVRWNKGTILKASVDYIRRMQKDLQKSRELENHSRRLEMTNKQLWLRIQELEMQARVHGLPTTSPSGMNMAELAQQVVKQELPSEEGPGEALLLGAEVPDPEPLPALPPQAQLPPPAQPAQPPSPFHHLDFSHSLSFGGGGNEGPPGYPEPLGPEHGSPFPNLSKKDLDLMLLDDSLLPLASDPLFSTMSPEASKASSRRSSFSMEEGDVL*