Sequence details bmy_00099 (Coding sequence)

Part of scaffold_1 (Scaffold)

For more information consult the page for scaffold_1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

IFT20 ENSTTRG00000010136 (Bottlenosed dolphin)

Gene Details

intraflagellar transport 20 homolog (Chlamydomonas)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009594, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 98.99%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0245)

IFT20 ENSBTAG00000008110 (Cow)

Gene Details

Intraflagellar transport protein 20 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010668, Cow)

Protein Percentage 98.48%
cDNA percentage 96.46%
Ka/Ks Ratio 0.05152 (Ka = 0.0069, Ks = 0.1331)

Additional orthologs identified in other species via the OPTIC pipeline.

IFT20 (Human)   Ift20 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 399 bp    Location:386727..380281   Strand:-
Raw sequence 
>bmy_00099
ATGGCCAAGGACATCCTGGGTGAAGCAGGGCTGCACTTTGATGAGCTGAACAAGCTGCGGGTGTTGGACCCAGAGGTTACCCAGCAGACCATAGAGCTGAAGGAAGAGTGCAAGGACTTTGTGGACAAAATCGGCCAGTTTCAGAAAATAGTTGGTGGTTTAATTGAGCTTGTCGACCAACTTGCAAAAGAAGCAGAAAATGAGAAGATGAAGGCCATTGGTGCTCGGAACTTGCTCAAATCTATAGCAAAACAGAGAGAAGCCCAACAGCAGCAACTCCAGGCACTAATAGCTGAAAAGAAAATGCAGCTTGAAAGGTATCGGGTTGAATATGAAGCTCTGTGTAAAGTAGAAGCAGAACAAAATGAATTTATTGACCAATTTATTTTTCAGAAATGA

Related Sequences

bmy_00099T0 Protein

Length: 133 aa      View alignments
>bmy_00099T0
MAKDILGEAGLHFDELNKLRVLDPEVTQQTIELKEECKDFVDKIGQFQKIVGGLIELVDQLAKEAENEKMKAIGARNLLKSIAKQREAQQQQLQALIAEKKMQLERYRVEYEALCKVEAEQNEFIDQFIFQK*