Part of scaffold_1 (Scaffold)

For more information consult the page for scaffold_1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NSRP1 ENSTTRG00000016338 (Bottlenosed dolphin)

Gene Details

nuclear speckle splicing regulatory protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015486, Bottlenosed dolphin)

Protein Percentage 94.68%
cDNA percentage 96.1%
Ka/Ks Ratio 0.22213 (Ka = 0.0266, Ks = 0.1198)

BT.31987 ENSBTAG00000019341 (Cow)

Gene Details

nuclear speckle splicing regulatory protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025760, Cow)

Protein Percentage 87.58%
cDNA percentage 92.08%
Ka/Ks Ratio 0.28002 (Ka = 0.0576, Ks = 0.2056)

NSRP1  (Minke Whale)

Gene Details

nuclear speckle splicing regulatory protein 1

External Links

Gene match (Identifier: BACU010480, Minke Whale)

Protein Percentage 98.51%
cDNA percentage 99.08%
Ka/Ks Ratio 0.39707 (Ka = 0.0066, Ks = 0.0167)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1413 bp    Location:1867853..1874105   Strand:+
>bmy_00143
ATGCAGAAAAAAAAGGAAGAAAGTAATCCAAAATTGCTTTTGGGAAAAGACCGAAAGCCCAAGTACATTCACAACTTACTAAAAGCAGTTGAGATTAGAAAAAAGGAACAGGAAAAAAGAATGGAAAAGAAAATACAAAGAGAACGAGAAATGGAAAAGGGAGAATTTGATGATAAAGAGGCATTTGTAACATCTGCTTATAAGAAAAAACTGCAAGAGAGAGCTGAAGAGGAAGAAAGAGAAAAGAGGGCTGCTGCCCTTGAAGCACGTTTGGATGTAACCAAGCAGAGCGATCTCAGTGGATTTTATAGGCACCTATTAAATCAAGCAGTTGGTGAGGAGGAAGTACCTACATGCAGCTTTCGTGAAGCCAGGTCTGGGATAAAAGAAGAGAAATCAAAGGGATATTCTGATGAAGTAAGTTCAGAAAACAGAACACCTCATGAGAACTGCATTCGCCAAACTGTTGTGAAAGTAGAGGAAAACCCAGATGCAGACAGTGACTTTGATGCTAAGATCAGTGAGGATGATGAAATGGAAGAAGATAATAAAGTGAACTGCAGAAGGGAAAAGGGCACAGAGACCTTAAAAAATGACTCCAGGCATCACAGGGGTCATACCCACTCACGGTCATCTAGTGAAGAAAGAGAGCATGGTACCAAATACCACACAAAAAGTTCCAAGTCAAGAGGACATGAGAAAAGAGAAGATCAGCACCAAGAGAGACAATCCAGGGAGGACAACTATTACGCTGACCGTGATTACCAAAAAGAAAAGAAGGATTCCCATAGGCACAGAGAGGCCAGTTACAGAGATTCACACTGGAAGAGGCATGAACAAGAAGACAGACTGAGGGGAAGAGACCAGAGAGAAAGAAATGATAGGGAATGGAAAAGGGAGAAAGACAGGGAGAAATACCCGTCAAGAGAACAAGAAAGAGACAGACAACGAAATGATTATGACCGACACATTGAGAAAGGAGGAGAGAAGGAAGAGAAAAGCAAAGAAAAGGAAGAGCATATGAAAGCAAGGAAAGAAAGATATGAAAACAGTGATAAATACAGAGATAGAGAAAAACGAGAAGTAAGTGTTCAGTCTTCAGAAAGAAATCAAGAAAGGGCAAAGGATAGGTTTCTTAACCAGGAAAGAGCCAATAAAATGAGAAACATGGAAAAGGACAAAGAAAGAAACCCAGAGAAACCCTCTAGTTCTGACACATCACTGGGAGCAAAACACAGAATCACAGAGGAATGCCAAGGGACTGGCAAAGAACAAGAGAGGCCACAGGAGACAGTGAACAAGTTTGCAAAGAGGAACAACGAAGAAACTGTAATGTCAGCGAGAGACAGATACTTGGCCCGGCAAATGGCACGGGTTAATGCAAAGACATATATTGAGAAAGAAGATGATTGA

Related Sequences

bmy_00143T0 Protein

Length: 471 aa      View alignments
>bmy_00143T0
MQKKKEESNPKLLLGKDRKPKYIHNLLKAVEIRKKEQEKRMEKKIQREREMEKGEFDDKEAFVTSAYKKKLQERAEEEEREKRAAALEARLDVTKQSDLSGFYRHLLNQAVGEEEVPTCSFREARSGIKEEKSKGYSDEVSSENRTPHENCIRQTVVKVEENPDADSDFDAKISEDDEMEEDNKVNCRREKGTETLKNDSRHHRGHTHSRSSSEEREHGTKYHTKSSKSRGHEKREDQHQERQSREDNYYADRDYQKEKKDSHRHREASYRDSHWKRHEQEDRLRGRDQRERNDREWKREKDREKYPSREQERDRQRNDYDRHIEKGGEKEEKSKEKEEHMKARKERYENSDKYRDREKREVSVQSSERNQERAKDRFLNQERANKMRNMEKDKERNPEKPSSSDTSLGAKHRITEECQGTGKEQERPQETVNKFAKRNNEETVMSARDRYLARQMARVNAKTYIEKEDD*