Sequence details bmy_00168 (Coding sequence)

Part of scaffold_1 (Scaffold)

For more information consult the page for scaffold_1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MYO1C ENSTTRG00000006860 (Bottlenosed dolphin)

Gene Details

myosin IC

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006487, Bottlenosed dolphin)

Protein Percentage 90.22%
cDNA percentage 89.55%
Ka/Ks Ratio 0.05454 (Ka = 0.0052, Ks = 0.0955)

MYO1C ENSBTAG00000001332 (Cow)

Gene Details

Unconventional myosin-Ic

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000029554, Cow)

Protein Percentage 97.25%
cDNA percentage 94.21%
Ka/Ks Ratio 0.03306 (Ka = 0.0116, Ks = 0.351)

MYO1C  (Minke Whale)

Gene Details

myosin IC

External Links

Gene match (Identifier: BACU010463, Minke Whale)

Protein Percentage 98.86%
cDNA percentage 98.67%
Ka/Ks Ratio 0.12229 (Ka = 0.0059, Ks = 0.0484)

Additional orthologs identified in other species via the OPTIC pipeline.

MYO1C (Human)   Myo1c (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3588 bp    Location:3196525..3172821   Strand:-
Raw sequence 
>bmy_00168
ATGGCCCTGCAAGTGGAGCTGATACCCACCGGGGAGATCATCCGTGTGGTTCATCCCCACAGGCCCTGCAAGCTTGTAAGCTGGGATGCTCTGGGCTGGGAGGAAGGGTGGCAGTGTCTTGCCAGGGCCCAGCAGCTTCCTCTCAAGCAAACCCCTTGGGAAAGAGCTGGGGAGGGACCCCCGAGTCCAAGCACCGAAGGAGGCGGGGGTGCCCGGGGAGTCCCGCGCCTCCGAGGCTCACGGAGGGGGCGGAACGGGGGGCGGGTCGGCCCCTCCCTCGTGACGCCGCCGCCGCCGCCGCCGCCGCCGAGCCCCGAGGCGAGAGCACGGGCAGCGGAGCAGGGCGCCAGGCCGACCGGGCAGGATGCGCTACCGAGCGTCGAGCCCTCAGACCCTTTTGAAGAGTGTGCTGTGGGTCCCGCAGTCTATGCTGGAGGGGAGAAGTGGCCTTCCCTTACCCTGCTGCCGCTGACCCTCTCCCGTGGCCCCTCCTTGCAGGCCCTGGGCAGTGACGGGGTGCGGGTGACCATGGAGAGTGCACTGACCGCCCGTGACCGGGTCGGGGTACAGGATTTCGTGCTGCTGGAGAACTTCACCAGCGAGGCAGCCTTCATTGAGAACCTGCGGCGACGCTTCCGGGAGAACCTCATCTACACCTACATTGGCCCTGTGCTGGTCTCTGTCAACCCCTACCGGGACCTGCAGATCTACAGCCGGCAACACATGGAGCGTTACCGGGGCGTCAGCTTCTATGAGGTGCCACCCCACCTGTTCGCGGTGGCTGACACTGCGTACCGGGCACTGCGCACGGAGCGCCGGGACCAGGCAGTGATGATCTCTGGGGAAAGCGGGGCAGGCAAGACAGAGGCCACCAAGCGGCTGCTGCAGTTCTATGCTGAGACCTGCCCAGCCCCCGAGCGGGGCGGTGCCGTGCGTGACCGGCTGCTGCAGAGCAACCCCGTGCTGGAGGCCTTCGGAAATGCCAAGACCCTCCGGAACGATAACTCCAGCAGGTTCGGGAAGTACATGGACGTGCAGTTTGACTTCAAGGGCGCCCCTGTGGGTGGCCACATCCTCAGTTACCTCCTGGAGAAGTCCCGGGTGGTGCACCAGAATCACGGGGAGAGGAACTTCCACATCTTCTACCAGCTGCTGGAGGGGGGCGAGGAGGAGACACTGCGCAGGCTGGGCCTGGAACGGAACCCCCAGAGCTACCTGTACCTGGTGAAGGGCCAGTGTGCCAAAGTCTCCTCCATCAACGACAAGAATGATTGGAAGGTTGTCAGGAAGGCTCTGACGGTCATCGACTTCACCGAGGATGAGGTGGAGGACCTGCTGAGCATCGTGGCCAGTGTCCTGCATCTGGGCAACATCCACTTTGCTGCCGATGAGGAGAGCAACGCCCAGGTCACCACCGAGAACCAGCTCAAGTATCTAACCAGGCTCCTTGGTGTGGAAGGCTCAACGTTGCGGGAAGCCCTGACACACAGGAAGATCATCGCCAAGGGCGAAGAGCTCCTGAGCCCGCTAAACCTAGAACAGGCTGCGTACGTGCGAGACGCCCTTGCCAAGGCCGTGTACAGTCGCACCTTTACCTGGCTGGTCACGAAGATCAACAGGTCGCTGGCCTCCAAGGATGCTGAGAGCCCCAGCTGGCGGAGCACCACGGTCCTCGGGCTCCTGGACATTTATGGCTTCGAAGTGTTTCAGAACAACAGCTTTGAGCAGTTCTGCATCAATTACTGCAACGAGAAGCTGCAGCAGCTCTTCATTGAGCTCACCCTCAAGTCGGAACAGGAGGAGTATGAGGCAGAGGGCATCGCGTGGGAGCCTGTCCAGTATTTCAACAACAAGATCATCTGTGACCTGGTGGAGGAGAAGTTCAAGGGCATCATCTCCATTTTGGATGAGGAGTGTCTGCGCCCCGGGGAGGCCACGGACCTGACCTTCCTGGAGAAGCTGGAGGACACAGTCAAGCACCATCCACACTTCCTGACACACAAGCTGGCTGACCAGCGAACCAGGAAATCTCTGGGCCGCGGGGAGTTCCGCCTGCTGCACTATGCTGGGGAGGTGACCTACAACGTGACCGGGTTTCTGGATAAAAACAATGACCTTCTCTTCCGGAACCTGAAGGAGACCATGTGCAGCTCAGAAAATCCCATCATGAGCCAGTGCTTCGACCGGAGCGAGCTCAGTGACAAGAAGCGGCCAGAGACGGTGGCCACCCAGTTCAAGATGAGYCTCCTGCAGCTGGTGGAGATCCTGAAATCTAAGGAGCCTGCCTACGTCCGCTGCATCAAGCCCAATGACGCCAAGCAGCCCGGCCGCTTTGACGAGGTGCTGATCCGGCACCAGGTGAAGTACCTGGGGCTGATGGAGAACCTGCGCGTGCGCAGAGCCGGCTTTGCCTATCGCCGCAAATACGAGGCTTTCCTGCAGAGGTACAAGTCACTGTGCCCAGAGACATGGCCCATATGGGCAGGACGGCCCCAGGATGGGGTGGCTGTGCTGGTCAGGTACCTCGGCTACAAGCCGGAAGAGTACAAGATGGGCAGGACCAAGATCTTCATCCGCTTCCCCAAGACCCTGTTTGCCACAGAGGACGCCTTGGAGGTCCGGCGGCAGAGCCTGGCCACGAAGATCCAGGCCACCTGGAGGGGCTTTCACTGGCGGCAGAAATTCCTCCGAGTGAAGCGATCAGCCATCTGCATCCAGTCGTGGTGGCGAGGAACCCTGGGCCGGAGGAAGGCAGCCAAGAGGAAGTGGGCAGCACAGACGATCCGGCGGCTCATCCGCGGCTTCATTCTGCGCCACGCACCCCGTTGCCCCGAGAATGCCTTCTTCCTGGATCACGTGCGCACCTCTTTTTTGCTCAACCTGCGGCGGCAGCTGCCCCGGAATATCCTGGACACTTCCTGGCCCACGCCGCCACCTGCCCTGCGTGAGGCCTCGGAGCTGCTGCGGGAGCTGTGCAGGAAGAACATGGTGTGGAAGTACTGCCGGAGCATCAGCCCTGAGTGGAAGCAGCAGCTGCAGCAGAAAGCCGTGGCTAGTGAGATCTTCAAGGGCAAGAAGGACAATTACCCCCAGAGTGTCCCCAGGCTCTTCATCAGCACACGGCTTGGTGCAGATGAGATCAGCCCCAAAGTGCTGCAGGCCCTGGGCTCCGAGCCCATCCAGTACGCCGTGCCCGTCGTGAAATATGACCGCAAGGGCTACAAGCCCCGCTCCCGGCAGCTGCTGCTGACGCCCAACGCCGTGGTCATCGTGGAGGATGCCAAAGTCAAGCAGAGGATTGAGTACGCCAACCTGACCGGAATCTCCGTCAGCAGCCTGAGCGACAGCCTCTTCGTGCTGCACGGGGACGTGGTGCTGCAGAGTGACCATGTGATTGAGACACTGACCAAGATGGCCCTCAGCGCCGACCGTGTGAACAGCATCAACATCAACCAGGGCAGCATCACGTTCGCAGGGGGTCCCGGCAGGGATGGCATCATCGACTTCACGACCGGCTCGGAGCTGCTCATCACCAAGGCCAAGAACGGGCACCTGGCTGTGGTGGCCCCACGGCTGAACTCTCGGTGA

Related Sequences

bmy_00168T0 Protein

Length: 1196 aa      View alignments
>bmy_00168T0
MALQVELIPTGEIIRVVHPHRPCKLVSWDALGWEEGWQCLARAQQLPLKQTPWERAGEGPPSPSTEGGGGARGVPRLRGSRRGRNGGRVGPSLVTPPPPPPPPSPEARARAAEQGARPTGQDALPSVEPSDPFEECAVGPAVYAGGEKWPSLTLLPLTLSRGPSLQALGSDGVRVTMESALTARDRVGVQDFVLLENFTSEAAFIENLRRRFRENLIYTYIGPVLVSVNPYRDLQIYSRQHMERYRGVSFYEVPPHLFAVADTAYRALRTERRDQAVMISGESGAGKTEATKRLLQFYAETCPAPERGGAVRDRLLQSNPVLEAFGNAKTLRNDNSSRFGKYMDVQFDFKGAPVGGHILSYLLEKSRVVHQNHGERNFHIFYQLLEGGEEETLRRLGLERNPQSYLYLVKGQCAKVSSINDKNDWKVVRKALTVIDFTEDEVEDLLSIVASVLHLGNIHFAADEESNAQVTTENQLKYLTRLLGVEGSTLREALTHRKIIAKGEELLSPLNLEQAAYVRDALAKAVYSRTFTWLVTKINRSLASKDAESPSWRSTTVLGLLDIYGFEVFQNNSFEQFCINYCNEKLQQLFIELTLKSEQEEYEAEGIAWEPVQYFNNKIICDLVEEKFKGIISILDEECLRPGEATDLTFLEKLEDTVKHHPHFLTHKLADQRTRKSLGRGEFRLLHYAGEVTYNVTGFLDKNNDLLFRNLKETMCSSENPIMSQCFDRSELSDKKRPETVATQFKMSLLQLVEILKSKEPAYVRCIKPNDAKQPGRFDEVLIRHQVKYLGLMENLRVRRAGFAYRRKYEAFLQRYKSLCPETWPIWAGRPQDGVAVLVRYLGYKPEEYKMGRTKIFIRFPKTLFATEDALEVRRQSLATKIQATWRGFHWRQKFLRVKRSAICIQSWWRGTLGRRKAAKRKWAAQTIRRLIRGFILRHAPRCPENAFFLDHVRTSFLLNLRRQLPRNILDTSWPTPPPALREASELLRELCRKNMVWKYCRSISPEWKQQLQQKAVASEIFKGKKDNYPQSVPRLFISTRLGADEISPKVLQALGSEPIQYAVPVVKYDRKGYKPRSRQLLLTPNAVVIVEDAKVKQRIEYANLTGISVSSLSDSLFVLHGDVVLQSDHVIETLTKMALSADRVNSININQGSITFAGGPGRDGIIDFTTGSELLITKAKNGHLAVVAPRLNSR*