Part of scaffold_1 (Scaffold)

For more information consult the page for scaffold_1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SERPINF1 ENSTTRG00000006874 (Bottlenosed dolphin)

Gene Details

serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006499, Bottlenosed dolphin)

Protein Percentage 89.9%
cDNA percentage 91.67%
Ka/Ks Ratio 0.30269 (Ka = 0.0278, Ks = 0.092)

SERPINF1 ENSBTAG00000009705 (Cow)

Gene Details

Pigment epithelium-derived factor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000012804, Cow)

Protein Percentage 89.42%
cDNA percentage 90.71%
Ka/Ks Ratio 0.22316 (Ka = 0.0574, Ks = 0.2571)

SERPINF1  (Minke Whale)

Gene Details

serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1

External Links

Gene match (Identifier: BACU019230, Minke Whale)

Protein Percentage 97.6%
cDNA percentage 98.4%
Ka/Ks Ratio 0.35638 (Ka = 0.0112, Ks = 0.0315)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1257 bp    Location:3420500..3431923   Strand:+
>bmy_00178
ATGCAGGCGCTTGTGCTACTCCTCTGGACTGGAGCCCTCCTCGGGCACGGCAGCTGCCAGAACACCAGCCTGGAGGAGATGCAGGGCTCCCTGACCCCCGAGGCCACGGGGGTGCCAGTGGAGGAGGAGGACCCCTTCTTCAAGGTCCCTGTGAACAAGCTGGCGGCCGTCGTCTCCAACTTTGGCTACGACTTGTACCGCGTGAGATCCAGGGAGAGCCCCGCTGCTAATGTGCTCCTGTCTCCGCTCAGCGTGGCCACGGCGCTCTCTGCCCTTTCGCTGGGAGCGGAGCAGCGGACAGAATCCAGCATTCACCGGGCTCTCTACTATGACCTGATCAGCAAGCCAGACATTCACAGTACCTATAAGGGACTCCTTGCCTCCGTCACCGCCCCGGAGAAGAACCTCAAGAGCGCTTCCCGGATCGTCTTTGAGAGGAAGCTGCGGATAAAAGCCAGCTTTGTCGCACCCCTGGAAAAGTCGTATGGGACCAGGCCCAGAATCTTGACTGGCAACACTCACTTGGACCTTCAGGAGATTAACAGCTGGGTGCAGGCCCGGATGAAAGGGAAAATCGCTAGGTCCACGAGGGAAATGCCCAGTGGAATCAGCATTCTCCTTCTTGGTGTGGCTTACTTCAAGGGGCAGTGGGTAACAAAGTTTGACTCCAGAAGGACTTCCCTAGATGATTTCCACTTGGATGAGGAGAGGACCGTGAAAGTCCCCATGATGTCAGACCCTAAGGCCATTTTACGCTACGGCTTGGATTCTGATCTCAACTGCAAGATTGCCCAGCTGCCCTTGACCGGGAGCATGAGTATCATTTTCTTCCTGCCTCTGAAAGTGACCCAGAACTTGACCATTATAGAAGAGAGCCTCACCTCTGAGTTCATTCATGACATAGACCGAGAACTGAAGACTGTTCAAGCGGTCCTGACCATCCCCAAGCTGAAGCTGAGTTACGAGGGCGAACTCACAAAGTCCGTGCAGGAGTTGAAGTTGCAGCCCTTGTTTGATTCACCAGACTTTAGCAAGATCACGGGCAAACCTATCAAACTTACTCAAGTGGAACATCGCACTGGCTTTGAGTGGAATGAAGATGGGGCGGGTACCACCCCCAGCCCAGGGCTTCAGCCTGCCCACCTCACCTTCTCCCTGGATTATCACCTTAACCAACCTTTCATCTTTGTACTGAGGGACACAGACACAGGGGCCCTTCTCTTCATAGGCAAAATTCTGGACCCCAGGGGCACTTAA

Related Sequences

bmy_00178T0 Protein

Length: 419 aa      View alignments
>bmy_00178T0
MQALVLLLWTGALLGHGSCQNTSLEEMQGSLTPEATGVPVEEEDPFFKVPVNKLAAVVSNFGYDLYRVRSRESPAANVLLSPLSVATALSALSLGAEQRTESSIHRALYYDLISKPDIHSTYKGLLASVTAPEKNLKSASRIVFERKLRIKASFVAPLEKSYGTRPRILTGNTHLDLQEINSWVQARMKGKIARSTREMPSGISILLLGVAYFKGQWVTKFDSRRTSLDDFHLDEERTVKVPMMSDPKAILRYGLDSDLNCKIAQLPLTGSMSIIFFLPLKVTQNLTIIEESLTSEFIHDIDRELKTVQAVLTIPKLKLSYEGELTKSVQELKLQPLFDSPDFSKITGKPIKLTQVEHRTGFEWNEDGAGTTPSPGLQPAHLTFSLDYHLNQPFIFVLRDTDTGALLFIGKILDPRGT*