Part of scaffold_1 (Scaffold)

For more information consult the page for scaffold_1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RPA1 ENSTTRG00000001169 (Bottlenosed dolphin)

Gene Details

replication protein A1, 70kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001099, Bottlenosed dolphin)

Protein Percentage 98.24%
cDNA percentage 97.84%
Ka/Ks Ratio 0.17818 (Ka = 0.0089, Ks = 0.0499)

RPA1 ENSBTAG00000009711 (Cow)

Gene Details

replication protein A 70 kDa DNA-binding subunit

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000012812, Cow)

Protein Percentage 95.58%
cDNA percentage 92.92%
Ka/Ks Ratio 0.09808 (Ka = 0.023, Ks = 0.2345)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1023 bp    Location:3501485..3521098   Strand:+
>bmy_00180
ATGACCTTCAATAATGAGACTTCTGTCATGCCCTGTGAAGATGGTCATCATTTACCCACAGTTCAGTTTGATTTCACAGGGATTGGTGACCTAGAGAACAAGTCTAAAGACTCACTTGTAGACATAATCGGGATCTGCAAGAGCTATGAAGATGTCACTAAAATCACAGTGAAGTCTAACAACAGAGAAGTCTCTAAGAGGAATATCTATTTGATGGACATGTCAGGGAAAGTGGTGAATGCTACTCTGTGGGGAGAAGATGCTGATAGATTTGATGGTTCTAGACAACCCGTGATGGCTATCAGAGGAGCCAGAGTTTCTGATTTTGGTGGACGGAGCCTCTCTGTACTGTCTTCAAGTACCGTCATTGTGAACCCTGACATCCCAGARGCCTACAAGCTTCGTGGATGGTTTGACTCGGAAGGACAAGCCTTAGCTGGCGTTTCCATCTCTGATCTAAAGAGTGGAGGAATAGGAGGGAGCAACACCAACTGGAAAACTTTATATGAGGTTAAATCAGAGAACCTGGGCCAAGGGGACAAGCCCGACTATTTTAGCTCTGTGGCGACAGTGGTGTATCTTCGCAAAGAGAACTGTATGTACCAGGCCTGCCCAACTCAGGACTGCAATAAGAAAGTGATTGATCAACAGAATGGATTGTACCGCTGCGAGAAGTGTGACAGTGAATTTCCCAATTTCAAGTACCGCATGATCCTGTCAGTAAATATTGCTGATTTTCAAGAGAATCAGTGGGTCACATGTTTCCAGGAGTCTGCAGAGGCCATCCTTGGACAAAGCACTGCTTATCTTGGAGAGTTAAAAGAGAAGAACGAACAAGCATTTGAGGAAGTTTTCCAGAATGCCAACTTTAGATCTTTTACATTCAGGATCAGGGTCAAATTGGAGACCTACAATGATGAGTCTCGAATTAAGGCCACTGTGATGGACGTGAAGCCCGTGGACTACAGAGAATATGGCAGAAGGTTGATCACGAGCATCAGGAGAAACGCCGCGGTGATGTGA

Related Sequences

bmy_00180T0 Protein

Length: 341 aa      View alignments
>bmy_00180T0
MTFNNETSVMPCEDGHHLPTVQFDFTGIGDLENKSKDSLVDIIGICKSYEDVTKITVKSNNREVSKRNIYLMDMSGKVVNATLWGEDADRFDGSRQPVMAIRGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGWFDSEGQALAGVSISDLKSGGIGGSNTNWKTLYEVKSENLGQGDKPDYFSSVATVVYLRKENCMYQACPTQDCNKKVIDQQNGLYRCEKCDSEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGQSTAYLGELKEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVMDVKPVDYREYGRRLITSIRRNAAVM*