Sequence details bmy_00183 (Coding sequence)

Part of scaffold_1 (Scaffold)

For more information consult the page for scaffold_1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HIC1 ENSBTAG00000025130 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000049772, Cow)

Protein Percentage 97.87%
cDNA percentage 95.25%
Ka/Ks Ratio 0.03397 (Ka = 0.0122, Ks = 0.3591)

HIC1  (Minke Whale)

Gene Details

hypermethylated in cancer 1

External Links

Gene match (Identifier: BACU006969, Minke Whale)

Protein Percentage 99.22%
cDNA percentage 99.31%
Ka/Ks Ratio 0.08222 (Ka = 0.003, Ks = 0.0363)

Additional orthologs identified in other species via the OPTIC pipeline.

HIC1 (Human)   Hic1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1866 bp    Location:3639127..3641276   Strand:+
Raw sequence 
>bmy_00183
ATGCTGGACACGATGGAGGCGCCCGGCCACTCGAGGCAGCTGCTGCTGCAGCTCAACAACCAGCGCACCAAGGGCTTCTTGTGCGACGTGATCATCGTGGTGCAGAACGCCCTCTTCCGCGCACACAAGAACGTGCTGGCGGCCAGCAGCGCCTACCTCAAGTCCCTGGTGGTGCATGACAACCTGCTCAACCTGGACCATGACATGGTGAGCCCGGCCGTGTTCCGCCTGGTGCTGGACTTCATCTACACCGGCCGCCTGGCTGATGGCGCGGAGGCGGCGGCGGCGGCCGCCGTGGCCCCGGGAGCCGAGCCGAGCCTGGGCGCCGTGCTGGCCGCCGCCAGCTACCTGCAGATCCCCGACCTCGTGGCGCTGTGCAAGAAGCGCCTCAAGCGCCACGGCAACCCGCCGGGCTCCGCGCCTCCCGAGCGGCCGCCGGGCGAGCGCGAGCTGCCCCCGCGCCCAGACAGCCCTCCCAGCGCCGGCCCCGCAGCCTACAAGGAGCCACCGCTCGCCCTGCCGCCCCTGCCGCCGCTGCCCTTCCAGAAGCTGGAGGAGGCCGGACCGCCTCCGGACCCGTTCCGCGGCGGCGGCGGCGGCAGCCCGGGACCCGAGCCCCCCGGCCGCCCCGACGGGCCCAGCCTCCTCTACCGCTGGATGAAGCACGAGCCAGGCCTGGGCAGCTACGGCGACGAGCTGGGCCGCGAGCGCGGCTCCCCCAGCGAACGATGCGAGGAGCGAGGCGGGGACCCGGCCGCCTCGCCCGGGGGTCCTCCGCTCGGCCTGGCGCCGCCGCCGCGCTACCCGGGCAGCTTGGACGGGCCTGGGGCGGGCGGCGACGGCGACGACTACAAGAGCAGCAGCGAGGAGACGGGCAGCAGCGAGGACCCCAGCCCACCCGGCGGCCACCTCGAGGGCTACCCGTGCCCGCACCTGGCCTATGGCGAGCCCGAGAGCTTCGGCGACAACCTGTACGTGTGCATCCCGTGCGGAAAGGGCTTCCCCAGCTCGGAGCAGCTGAACGCGCACGTGGAGGCGCACGTGGAGGAGGAGGAGGCGCTGTACGGCAGGGCCGAGGCGGCTGAGGTGGCTGCAGGGGCCGCCGGCCTCGGGCCCCCTTTTGGAGGCGGTGGGGACAAGGTCGCTGGGGCTCCGGGGGGCCTGGGCGAGCTGCTGCGGCCGTACCGCTGCGCGTCGTGCGACAAGAGCTACAAGGACCCGGCCACGCTGCGGCAGCACGAGAAGACGCACTGGCTGACCCGGCCCTATCCGTGCACCATCTGCGGGAAGAAGTTCACGCAGCGCGGGACCATGACGCGCCACATGCGCAGCCACCTGGGCCTCAAGCCCTTCGCGTGCGACGCGTGCGGCATGCGCTTCACGCGCCAGTACCGCCTCACCGAGCACATGCGCATCCACTCGGGCGAGAAGCCCTACGAGTGCCAGGTGTGCGGCGGCAAGTTCGCCCAGCAACGCAACCTCATCAGCCACATGAAGATGCACGCCGTGGGTGGCGCGGCCGGCGCGGCTGGGGCGCTGGCGGGGCTGGGGGGGCTCCCCGGCGTCCCCGGCCCCGATGGCAAGGGCAAGCTCGACTTCCCCGAGGGCGTCTTTGCTGTGGCGCGCCTCACGGCTGAACAGCTGAGCCTGAAGCAGCAGGACAAGGCGGCTGCGGCCGAGCTGCTGGCCCAGACCACGCACTTCCTGCACGACCCCAAGGTGGCGCTCGAGAGCCTCTACCCGTTGGCCAAGTTCACTGCGGAGCTGGGCCTCAGCCCCGACAAGGCGGCCGAGGTGCTGAGCCAGGGAGCGCACCTGGCCGCCGGCCCCGACGGCCGGACCATCGACCGTTTCTCCCCCACCTAG

Related Sequences

bmy_00183T0 Protein

Length: 622 aa      View alignments
>bmy_00183T0
MLDTMEAPGHSRQLLLQLNNQRTKGFLCDVIIVVQNALFRAHKNVLAASSAYLKSLVVHDNLLNLDHDMVSPAVFRLVLDFIYTGRLADGAEAAAAAAVAPGAEPSLGAVLAAASYLQIPDLVALCKKRLKRHGNPPGSAPPERPPGERELPPRPDSPPSAGPAAYKEPPLALPPLPPLPFQKLEEAGPPPDPFRGGGGGSPGPEPPGRPDGPSLLYRWMKHEPGLGSYGDELGRERGSPSERCEERGGDPAASPGGPPLGLAPPPRYPGSLDGPGAGGDGDDYKSSSEETGSSEDPSPPGGHLEGYPCPHLAYGEPESFGDNLYVCIPCGKGFPSSEQLNAHVEAHVEEEEALYGRAEAAEVAAGAAGLGPPFGGGGDKVAGAPGGLGELLRPYRCASCDKSYKDPATLRQHEKTHWLTRPYPCTICGKKFTQRGTMTRHMRSHLGLKPFACDACGMRFTRQYRLTEHMRIHSGEKPYECQVCGGKFAQQRNLISHMKMHAVGGAAGAAGALAGLGGLPGVPGPDGKGKLDFPEGVFAVARLTAEQLSLKQQDKAAAAELLAQTTHFLHDPKVALESLYPLAKFTAELGLSPDKAAEVLSQGAHLAAGPDGRTIDRFSPT*