Part of scaffold_1 (Scaffold)

For more information consult the page for scaffold_1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000001203 (Bottlenosed dolphin)

Gene Details

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001128, Bottlenosed dolphin)

Protein Percentage 96.52%
cDNA percentage 97.4%
Ka/Ks Ratio 0.22577 (Ka = 0.0154, Ks = 0.0681)

TRPV1 ENSBTAG00000018880 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025131, Cow)

Protein Percentage 93.06%
cDNA percentage 92.26%
Ka/Ks Ratio 0.09718 (Ka = 0.0313, Ks = 0.3216)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2514 bp    Location:4588145..4563929   Strand:-
>bmy_00200
ATGAAGAAATGGGAGAGCTCAGACTTATGGGAATCTCAGGACCTGCCTCAAGAGGACTCCTGCCCAGATCCCCTAGATGGAGACCCTAACTCCAGGCCAGCTCCAGCCAAGCCCCACAGCTTCCCTGTGGCCAARAGCCGCAGCCGGCTCTTTGGAAAGGGTGATTCGGAGGACACATCCCTCATGGACTGCTCTTCTGAGGAAGGTCAGCTGGCATCCTGCCCGGCCATCACAGTCAGCCCTGTTGTCATCGTCCAGAGGCCTGGGGATGGTCCCACCTGTGCCAGGCAGCCACCCCAGGACTCTGCTGCCGAGAACCTCAAGCTCTACGATCGCAGGAAGATCTTTGAAGCAGTTGCTCAGAATAACTGCAAGCAGCTGCAGAGCCTGCTGCTCTTTCTGAAGAAGAGCAAGAAGCATCTCACGGACAGCGAATTCAAAGACCCGGACACGGGGAAGACCTGCCTGCTGAAAGCCATGCTCAACCTGCACAACGGGCAGAACGACACCATCCCGCTGCTCCTGGAGATCGCCCGGCAGACGGACAGCCTGAAGGAGCTGGTCAACGCCAGCTACACGGACAGCTACTACAAGGGCCAGACGGCACTGCACATTGCCATCGAGAGACGGAACATGGCACTGGTGACCCTCCTGGTGGAGAACGGGGCCGACGTCCAGGCCGCGGCCAATGGGGACTTCTTTAAGAAAACCAAAGGGCGGCCTGGCTTCTATTTTGGTGAGCTGCCCCTCTCCCTGGCTGCGTGCACCAACCAGCTGGGCACCGTGAAGTTCCTGCTGCAGAACTCCTGGCAGTCGGCCGACATCAGCGCCAGGGACTCGATGGGCAACACTGTGCTGCACGCGCTGGTGGAGGTGGCTGACAACACGGCCGACAACACCAAGTTTGTGACGAGCATGTACAATGAGATTCTGATCCTGGGGGCCAGACTCCACCCTGCGCTGAAGCTGGAGGAGCTCACCAACAAGAAGGGGCTGACGCCGTTGGCTCTGGCCGCCAGGAGTGGGAAGATCGGGGTCCTGGCCTATATTCTCCAGAGGGAGATCCAGGAGCCCGAGTGCAGGCACCTGTCCAGGAAGTTCACCGAGTGGGCCTACGGGCCCGTGCACTCCTCACTGTATGACCTGTCCTGCATCGACACCTGTGAGAAGAACTCAGTGCTGGAGGTGATTGCCTACAGCAGCAGTGAGACACCTAATCGCCATGACATGCTCTTAGTGGAGCCGCTCAACCGCCTCCTGCAGGACAAGTGGGATAGATTCGTCAAGCGCATCTTCTACTTCAACTTCTTCATCTACTGCCTGTATATGATCATCTTCACCACGGCCGCCTACTACAGGCCTGTGGAAGGCCGGCCTCCCTTTAAGCTGAAACACACCGTTGGGGGCTATTTCCGAGTCACTGGAGAGATTCTTTCTGTAGCAGGRGGAGTCTACTTTTTTTTCCGAGGGATTCAGTATTTCCTGCAGAGACGGCCATCACTGAAGACCTTGTTTGTGGACAGCTACAGTGAGATGCTTTTCTTTGTGCAGTCGCTGTTCATGCTGGGGACCGTCGTGCTATACTTCTGCCACTGCAAGGAGTACGTGGCCTCCATGGTTTTCTCCCTGGCCATGGGCTGGACCAACATGCTCTACTACACCCGCGGCTTCCAGCAGATGGGCATCTATGCTGTCATGATTGAGAAGATGATCCTGAGAGACCTGTGTCGCTTCATGTTTGTTTACCTCGTTTTCTTATTTGGGTTTTCCACAGCGGTGGTGACACTGATTGAGGATGGGAAGAATGACTCCGTGTCGGCTGAGTCGACGTCGCACAGGTGGCGAGGTCCTGGCTGTCGGCCATCCGACAGCTCCTACAACAGCCTGTACTCCACGTGTCTGGAGCTGTTCAAGTTCACCATCGGCATGGGCGACCTGGAGTTCACGGAGAACTATGACTTCAAGGCTGTCTTTGTCATCCTGTTACTGGCCTATGTGGTTCTCACGTACATCCTCCTGCTCAACATGCTCATTGCCCTCATGGGTGAGACGGTCAACAGGATCGCACAGGAGAGCAAGAACATCTGGAAGCTGCAGAGAGCCATCACCATCCTGGACACGGAGAAGAGCTTCCTTAAGTGTATGAGGAAGGCCTTTCGCTCAGGCAAGCTGCTGCAGGTGGGGTACACAGCTGACGGCAAGGACGACTACAGGTGGTGTTTCAGGGTGGACGAGGTGAATTGGACCACCTGGAACACCAACGTGGGCATCATCAATGAAGACCCGGGCAACTGTGAGGGCATCAAACGCACCCTGAGCTTCTCCCTGCGGTCGGGCCGAGCTGCAGGGAGGAACTGGAAGAACTTTGCCCTGGTTCCCCTCTTAAGAGATGCAAGTACTCGAGAAAGACACCCTGCGCAGCCTGAGGAAGTTCATCTGAAGCACTTCGCGGGGTCCCTCAAGCCAGAAGATKCCGAGATTATCAAGGATTCTGCTGCTTTAGGGGAGAAGTGA

Related Sequences

bmy_00200T0 Protein

Length: 838 aa      View alignments
>bmy_00200T0
MKKWESSDLWESQDLPQEDSCPDPLDGDPNSRPAPAKPHSFPVAKSRSRLFGKGDSEDTSLMDCSSEEGQLASCPAITVSPVVIVQRPGDGPTCARQPPQDSAAENLKLYDRRKIFEAVAQNNCKQLQSLLLFLKKSKKHLTDSEFKDPDTGKTCLLKAMLNLHNGQNDTIPLLLEIARQTDSLKELVNASYTDSYYKGQTALHIAIERRNMALVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLGTVKFLLQNSWQSADISARDSMGNTVLHALVEVADNTADNTKFVTSMYNEILILGARLHPALKLEELTNKKGLTPLALAARSGKIGVLAYILQREIQEPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEVIAYSSSETPNRHDMLLVEPLNRLLQDKWDRFVKRIFYFNFFIYCLYMIIFTTAAYYRPVEGRPPFKLKHTVGGYFRVTGEILSVAGGVYFFFRGIQYFLQRRPSLKTLFVDSYSEMLFFVQSLFMLGTVVLYFCHCKEYVASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYLVFLFGFSTAVVTLIEDGKNDSVSAESTSHRWRGPGCRPSDSSYNSLYSTCLELFKFTIGMGDLEFTENYDFKAVFVILLLAYVVLTYILLLNMLIALMGETVNRIAQESKNIWKLQRAITILDTEKSFLKCMRKAFRSGKLLQVGYTADGKDDYRWCFRVDEVNWTTWNTNVGIINEDPGNCEGIKRTLSFSLRSGRAAGRNWKNFALVPLLRDASTRERHPAQPEEVHLKHFAGSLKPEDXEIIKDSAALGEK*