Sequence details bmy_00224 (Coding sequence)

Part of scaffold_1 (Scaffold)

For more information consult the page for scaffold_1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TXNDC17 ENSTTRG00000012072 (Bottlenosed dolphin)

Gene Details

thioredoxin domain containing 17

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011448, Bottlenosed dolphin)

Protein Percentage 96.04%
cDNA percentage 98.35%
Ka/Ks Ratio 1.51369 (Ka = 0.0187, Ks = 0.0124)

BT.27268 ENSBTAG00000021864 (Cow)

Gene Details

thioredoxin domain-containing protein 17

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000029147, Cow)

Protein Percentage 93.07%
cDNA percentage 96.37%
Ka/Ks Ratio 0.64605 (Ka = 0.0331, Ks = 0.0512)

TXNDC17  (Minke Whale)

Gene Details

thioredoxin domain containing 17

External Links

Gene match (Identifier: BACU006937, Minke Whale)

Protein Percentage 99.01%
cDNA percentage 98.35%
Ka/Ks Ratio 0.09805 (Ka = 0.0047, Ks = 0.0482)

Additional orthologs identified in other species via the OPTIC pipeline.

TXNDC17 (Human)   Txndc17 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 303 bp    Location:5595510..5594206   Strand:-
Raw sequence 
>bmy_00224
ATGGCCCGCTACGAAGAGGTGAGCGTGTACGGCTACGAGGAGTTCACGCAGGCGGTGGAGCAGCACAGTGGCAAGACCATTTTCGCCTACTTTTCTGGTTCTAAGGACGCCGAAGGCAAAAGCTGGTGCCCCGACTGCGTGCAGGCTGAACCGGTCGTACGAGAGGGGCTGAAGCATGCTGGTGAAGGATGTGTGTTCATCTACTGCCAAGTAGGAGAAAAACCTTATTGGAAAGATCCAAATAATGACTTCAGGAAAAAGTTGAAATTAACTGCAGTGCCTACACTACTTAAATATGGAACA

Related Sequences

bmy_00224T0 Protein

Length: 101 aa      View alignments
>bmy_00224T0
MARYEEVSVYGYEEFTQAVEQHSGKTIFAYFSGSKDAEGKSWCPDCVQAEPVVREGLKHAGEGCVFIYCQVGEKPYWKDPNNDFRKKLKLTAVPTLLKYGT