Part of scaffold_2 (Scaffold)

For more information consult the page for scaffold_2 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RAB22A ENSTTRG00000015587 (Bottlenosed dolphin)

Gene Details

RAB22A, member RAS oncogene family

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014769, Bottlenosed dolphin)

Protein Percentage 82.99%
cDNA percentage 85.22%
Ka/Ks Ratio 0.62801 (Ka = 0.1468, Ks = 0.2337)

BT.19047 ENSBTAG00000018053 (Cow)

Gene Details

ras-related protein Rab-22A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000024031, Cow)

Protein Percentage 82.47%
cDNA percentage 82.3%
Ka/Ks Ratio 0.35415 (Ka = 0.1471, Ks = 0.4155)

RAB22A  (Minke Whale)

Gene Details

RAB22A, member RAS oncogene family

External Links

Gene match (Identifier: BACU011285, Minke Whale)

Protein Percentage 81.37%
cDNA percentage 83.82%
Ka/Ks Ratio 0.52488 (Ka = 0.1535, Ks = 0.2924)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 663 bp    Location:241416..199037   Strand:-
>bmy_00227
ATGCCTTTCCCAAACACTACGGGCCTCTACGTATTTGTGACTGAGCTCATAAACTCCCCATCAGAGGCTCGGCCCTCTGCTTCTCTTTCCGTGGACTTTGTGGAAGAGAAAAGGACCAACATGTCCTCAGCCAAAACGGATGTGTTGGATGCACTGGCTCTGTTAACAGGCCTCTACCAGGTCTCTCTTTATAGGGCATCTTTTATGACCAAGACTGTCCAGTACCAAAATGAGCTACATAAATTCCTAATCTGGGACACAGCTGGACAAGAACGATTTCGTGCCTTAGCGCCAATGTACTATCGCGGCTCGGCTGCAGCYATAATTGTTTATGATATCACAAAAGAAGAGACATTTTCAACATTAAAGAATTGGGTAAAAGAGCTTCGACAGCACGGCCCACCCAATATTGTAGTTGCCATTGCAGGAAATAAGTGTGATCTTATCGACGTAAGAGAGGTCATGGAGAGAGATGCTAAGGACTACGCCGACTCCATCCATGCAATTTTTGTAGAGACCAGCGCAAAAAACGCGATAAACATAAACGAACTCTTTATAGAAATTAGTCGAAGAATTCCATCCACTGACGCCAACCCGCCTTCCGGTGGAAAGGGCTTCAAACTCCGAAGACAGCCTTCGGAGCCGAAACGGAGCTGCTGCTGA

Related Sequences

bmy_00227T0 Protein

Length: 221 aa      View alignments
>bmy_00227T0
MPFPNTTGLYVFVTELINSPSEARPSASLSVDFVEEKRTNMSSAKTDVLDALALLTGLYQVSLYRASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANPPSGGKGFKLRRQPSEPKRSCC*