Part of scaffold_2 (Scaffold)

For more information consult the page for scaffold_2 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TFAP2C ENSTTRG00000005983 (Bottlenosed dolphin)

Gene Details

transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005657, Bottlenosed dolphin)

Protein Percentage 98.67%
cDNA percentage 97.78%
Ka/Ks Ratio 0.11177 (Ka = 0.0071, Ks = 0.0632)

TFAP2C ENSBTAG00000002065 (Cow)

Gene Details

transcription factor AP-2 gamma

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002671, Cow)

Protein Percentage 96.44%
cDNA percentage 93.7%
Ka/Ks Ratio 0.07977 (Ka = 0.0176, Ks = 0.2206)

TFAP2C  (Minke Whale)

Gene Details

transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)

External Links

Gene match (Identifier: BACU011299, Minke Whale)

Protein Percentage 99.26%
cDNA percentage 98.6%
Ka/Ks Ratio 0.12918 (Ka = 0.0045, Ks = 0.0347)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1392 bp    Location:1584456..1576324   Strand:-
>bmy_00239
ATGTTGTGGAAAATAACCGATAATGTCAAGTATGAAGAGGACTTAGCGGGGTTTCGTACTAACCGGGTCTCCGTTTCTCTGCCCCAGGATCGCCACGACGCGAGCAGCAATGGGAACCCGCGCCTGCCTCACCTCTCCTCCGCCGGGCAGCATCTCTACAGCCCCGCGCCGCCCCTCTCCCATGCTGGAGTCGCCGAATACCAGCCACCACCCTACTTTCCGCCTCCCTACCAGCAGCTGGCTTACTCGCAGGCAGCCGACCCCTACTCGCATCTGGGAGAAGCGTACGCCGCCGCCATCAACCCCCTGCACCAGCCGGCGCCCACCGGCAGCCAGCAGCAGGCCTGGCCGGGCCGCCAGAGCCAGGAGGGGGCTGGCCTGCCCTCGCACCACGCGCGCCCGGCCGGCCTGTTGCCCCACCTCTCCGGGCTGGACGGCGGCGCCGTGAGCGCCCGCAGGGACGCCTACCGCCGCTCGGACCTGCTGCTGCCCCACTCTCACGCCCTGGACGCCGCGGGCCTGGCCGAGAACCTGGGGCTCCACGACGTGGCGCAGCAGATGGAGGAGGTGCAGAATGTCGACGACCAGCACTTACTTCTGCATGATCAAACGGTTATTCGCAAAGGTCCTATTTCAATGACGAAGAACCCCTTGAGTCTCCCWTGTCAGAAGGAGCTGGTGGAGGCTGTGATGAATCCCAGCGAGGTCTTCTGCTCGGTCCCTGGAAGATTGTCCCTCCTCAGCTCTACATCTAAATACAAAGTAACAGTTGCTGAAGTCCAGAGGCGACTGTCCCCGCCTGAGTGCTTAAATGCCTCATTACTGGGAGGTGTCCTCAGAAGAGCCAAATCTAAAAATGGTGGCCGGTCCTTGCGGGAGAAGTTGGACAAGATTGGGTTGAATCTTCCAGCCGGGAGACGGAAAGCTGCTCACGTCACCCTCCTGACATCTTTAGTAGAAGGTGAGGCTGTTCATTTGGCTCGGGACTTTGCMTATGTCTGCGAAGCAGAATTTCCTAGTAAATCCGTGGCCGAGTATTTAACCAGACCTCATCTCGGAGGACGGAATGAGATGGCAACTAGGAAGAATATGCTGCTGGCTGCACAGCAAGTGTGTAAAGAATTCACAGACCTTCTCAATCAAGACCGAACTCCCAATGGGAAYAACCGGCCCACCCCGGTCCTGGAGACCAGCATCCAGAACTGCTTGTCTCATTTCAGCCTGATTACCCACGGGTTTGGCAGCCAGGCCATCTGTGCTGCTGTGTCTGCCGTGCAGAACTACATAAAAGAAGCCCTGATGGTCATAGACAAATCCTACATGAATCCCGGAGACCAGAGTCCAGCCGATTCTAGCAAAGCCCTGGAAAAGATGGAGAAGCACAGGAAGTAA

Related Sequences

bmy_00239T0 Protein

Length: 464 aa      View alignments
>bmy_00239T0
MLWKITDNVKYEEDLAGFRTNRVSVSLPQDRHDASSNGNPRLPHLSSAGQHLYSPAPPLSHAGVAEYQPPPYFPPPYQQLAYSQAADPYSHLGEAYAAAINPLHQPAPTGSQQQAWPGRQSQEGAGLPSHHARPAGLLPHLSGLDGGAVSARRDAYRRSDLLLPHSHALDAAGLAENLGLHDVAQQMEEVQNVDDQHLLLHDQTVIRKGPISMTKNPLSLPCQKELVEAVMNPSEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAAHVTLLTSLVEGEAVHLARDFAYVCEAEFPSKSVAEYLTRPHLGGRNEMATRKNMLLAAQQVCKEFTDLLNQDRTPNGNNRPTPVLETSIQNCLSHFSLITHGFGSQAICAAVSAVQNYIKEALMVIDKSYMNPGDQSPADSSKALEKMEKHRK*