Part of scaffold_3 (Scaffold)

For more information consult the page for scaffold_3 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PDGFRL ENSTTRG00000003424 (Bottlenosed dolphin)

Gene Details

platelet-derived growth factor receptor-like

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003212, Bottlenosed dolphin)

Protein Percentage 83.76%
cDNA percentage 86.31%
Ka/Ks Ratio 0.64086 (Ka = 0.1389, Ks = 0.2167)

BT.47512 ENSBTAG00000001966 (Cow)

Gene Details

platelet-derived growth factor receptor-like protein precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002553, Cow)

Protein Percentage 78.98%
cDNA percentage 79.62%
Ka/Ks Ratio 0.25155 (Ka = 0.1587, Ks = 0.6309)

PDGFRL  (Minke Whale)

Gene Details

platelet-derived growth factor receptor-like

External Links

Gene match (Identifier: BACU005183, Minke Whale)

Protein Percentage 84.74%
cDNA percentage 88.64%
Ka/Ks Ratio 0.63118 (Ka = 0.1118, Ks = 0.1772)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 945 bp    Location:836497..849671   Strand:+
>bmy_00274
ATGTTACTGCAGCCTATCACAGGAGAATCTCACCTACGTCAGAAAAGGCCATCTGAGAAAGGGCGCTCTGCCTGGAGCCGCTGGGGCTTTATCTGCGAGGATGATGGAGCAGGGAGAGATGGGCGCGAGGCCCCAGCCCCACCGCGACCCGGCTTTGCTCTTGTTGACAGTGTGAAGCAGCACGAGCGCTACGGCCAGCTGACCCTGGTCAACTCCACCGCGGCCGACACGGGTGAATTCAGCTGCTGGGGGCAGCTCTGCAACGGCTACATCTGCAGGAGGGACGAGGCCAAAACGGGCTCCACCTACATCATTTTTACAGAGAAAGGAGAACTCTTTGTACCTTCTCCCAGTTACTTTGATGTCATCTACTTGAACCCGGACAGACAGGCTGTGGTTCCTTGTCGAGTGACTGTCCTGTCGGCCAAAGTCACGCTCCACAGGGAGTTCCCGGCCAAGGAGATCCAGGCCAACGGAACAGACATCGTTTATGATATGAAGAGAGGCTTTGTGTATCTGCAACCTCACTCCGACCACCAGGGGGTGGTCTACTGCAAGGCGGAGGTCGGGGGCAAGTCTCAGATCTCTGTCAAGTACCAGCTGCTCTATGCGGAAGTTCCCAGTGGTCCTCCATCAACAACCATCTTGGCATCTGCGAACAAAGTGAAGGGTGGGGATGACATCAGCATCCTCTGCACGGTCCTCGGGGAGCTGGATGTGGAGGTGGAATTCAGGTGGATCTACCCAGGGCAGAAGGATGAAAGGCCCGTGACGATTCAAGACACTTGGCGGCTGATCCAGAGAGGACTGGGCCACACCACGAGGATCTCCCAGAGCGTTCTGATCGTTGAAGACTTTGAGACGGTTGACGCAGGTTATTACATTTGCACCGCTCAGAATCTCCGAGGACAGACCTCAGTAGCTACCACTGTGGAGTTTTCCTGA

Related Sequences

bmy_00274T0 Protein

Length: 315 aa      View alignments
>bmy_00274T0
MLLQPITGESHLRQKRPSEKGRSAWSRWGFICEDDGAGRDGREAPAPPRPGFALVDSVKQHERYGQLTLVNSTAADTGEFSCWGQLCNGYICRRDEAKTGSTYIIFTEKGELFVPSPSYFDVIYLNPDRQAVVPCRVTVLSAKVTLHREFPAKEIQANGTDIVYDMKRGFVYLQPHSDHQGVVYCKAEVGGKSQISVKYQLLYAEVPSGPPSTTILASANKVKGGDDISILCTVLGELDVEVEFRWIYPGQKDERPVTIQDTWRLIQRGLGHTTRISQSVLIVEDFETVDAGYYICTAQNLRGQTSVATTVEFS*