Part of scaffold_3 (Scaffold)

For more information consult the page for scaffold_3 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PCM1 ENSTTRG00000003427 (Bottlenosed dolphin)

Gene Details

pericentriolar material 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003215, Bottlenosed dolphin)

Protein Percentage 83.97%
cDNA percentage 85.14%
Ka/Ks Ratio 0.38122 (Ka = 0.0179, Ks = 0.047)

PCM1 ENSBTAG00000007236 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053719, Cow)

Protein Percentage 92.27%
cDNA percentage 93.54%
Ka/Ks Ratio 0.21337 (Ka = 0.0388, Ks = 0.182)

PCM1  (Minke Whale)

Gene Details

pericentriolar material 1

External Links

Gene match (Identifier: BACU005179, Minke Whale)

Protein Percentage 96.11%
cDNA percentage 96.9%
Ka/Ks Ratio 0.41928 (Ka = 0.0255, Ks = 0.0608)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 6585 bp    Location:1117146..1205056   Strand:+
>bmy_00278
ATGGCCACAGGAGGARGTCCTTTTGAAGAAGGCATGAATGATCAGGATTTACCAGACTGGAGCAGTGAGGGTGTTGATGACCGGCTCAACAACATGGATTGGGGTGGCCAACAGAAGAAGGCAAATAGATCATCAGAAAAGAATAAGAAAAAGTTTGGTGTAGAAAGTGGTAAAAGGGTAACTAATGATATTTCTCCGGAGTCATCGCCAGGAGTTGGAAGGCGAAGAACGAAGACTCCATATACGTTTCCGCATAGTAGATACATGACGCAGATGTCTGTTCCCGAGCAGGCAGAATTAGAGAAACTTAAACAGCGGATAAACTTCAGTGATTTAGATCAGAGAAGCATTGGAAGTGATTCTCAAGGTAGAGCAACAGCTGCTAACAACAAACGTCAGCTTAGTGAAAACCGAAAGCCCTTCAACTTTTTGCCTATGCAGATTAATACTAACAAGAGCAAAGATGCTGCTGTAAATCCTCAAAAGAGAGAAATGATTGGATCAGCACAATGTAAAGAGTTGTTTGCTTCTGCTTTGAGTAATGACCTTTTGCAAAACTGTCAAGTCTCTGAAGAAGATGGCAGAGGAGAGCCTGCAATGGAGAGCAGCCAGATTGTAAGCAGGCTTGTTCAGATTCGTGACTATATTACTAAAGCTAGTTCCATGCGGGAAGATCTTGTAGAGAAAAATGAAAGATCTGCTAATGTTGAGCGCCTTACTCATCTAATAGATCACCTTAAAGAACAAGAAAAGTCATATATGAAATTTCTGCAAAAAATTCTTGCTAGAGAAAATGAGGAGGAGGATGTTCGGACTGTAGATTCAGCCGTGGGATCTGGTTCTGTAGCTGAGAGCACATCGCTAAACATAGATGTGCAGTCTGAGGCTTCAGATACCACGGCCAGAGATCCTCAGCAGGAGCCTATGGAAGAGATAGAAAATTTGAAGAAACAACATGATTTATTAAAAAGGATGTTACAGCAGCAGGAGCAACTGAGAGCTCTGCAGGGACGACAAGCTGCTCTTCTTGCTCTGCAGCATAAGGCAGAGCAAGCTATCGCTGTGATGGATGATTCTGAAAAGGTTGCAGGGACAACTCCTGGCCATCATACTGTACCGTGCAGACAGCCAGCTCGCTCTCCTTTTCATCAGAGAGTACCCTTAAGAGTTGTAACAGAAACTACAGGTAGCCTATCTGGAGTCAGTATCACATCTGAACTAAATGAAGAATTGAATGATTTAATTCAACGTTTTCATAATCAGCTTCCTGTTCCAGACAATAGAAGACAAGCAGAAAGTCTTTCATTAACTAGGGAGGTTTCTCAGAGCAGAAATCCATCAGTTTCAGAGCATTTACCTGATGAGAAAGTCCAGCTTTTTAGCAAAATGAGAGTGTTACAAGAAAAGAAACAAAAAATGGACAAGCTGCTTGGAGAACTTCATACACTTCGAGATGAGCATTTGAACAATTCATCATTTGTGCCTTCTTCAGCCTCTCCCCAAAGGAGTGTGGATCAGAGAAGTACAGCCGCAGCGCCCTCTGCTCCTGTAGGCTTAACTCCAGTTGTCAATGGAGAGTCCAGTAGCCTCACATCATCCGTTCCTTATCCTGCTGCTTCTCTAGTTTCTCAGAATCAGAGTGAAAATGAAGGCCACCTAAATCCAACTGAAAAACTCCAGAAGTTAAATGAAGTTCGAAAGAGGTTGAATGAGCTAAGAGAATTAGTTCATTATTATGAGCAAACATCAGATATGATGACAGATGCTGTAAATGAAAACACAAAAGAMGAAGAAACTGAAGAGTCAGAATATGATTCCGAGCATGAAAATTCTGAACCTGTTACTAACATTCGAAATCCACAAGTAGCTGCCACCTGGAACGAAGTAAATAGTAATTCTAATGCACAGTGTGTTTCTAATAATAGAGATGGGAGATCAGTTAATTCTAATTGTGAAATTAACAACAGATCTGCTGCCAACATAAGAGCTCTAAACATGCCTCCTTCTTTAGCAGATTGTCGATATAATAGAGAAAGAGAACAGGGGATTCATGTTGCACAAGGTGAAGATGATGAGGAGGAGGAGGAAGAAGCAGAAGATGAGGCAGTCAGTGGAGCTTCATTATCTAGTCATAGGAGCAGTCTGGTTGATGAGACTCCTGAAGATGCTGAATTTGAACAGAAGATCAATAGGCTTATGGCTGCAAAACAGAAACTTAGACAGTTACAAGATCTTGTTGCATTGGTGCAGGATGATGATACAGCAGATCAAGGAGTTATCTCTGCCAATACCTCAAATTTGGATGATTTCTACCCAGCAGAAGAAGACACCAAACAAAATGCAAATAACACTAGAGGAAATACCAATAAAACACAGAAAGATGCTGGAGTAAATGAAAAGGCAAGAGAGAAATTTTATGAGGCTAAACTACAGCAGCAACAGAGAGAGCTCAAACAATTGCAGGAAGAAAGAAAGAAACTGATTGAGATTCAAGAGAAAATTCAAGCATTGCAAAAGGCATGTCCTGACCTACAGCTGTCAGCCACTAGTGCGGGTAATTGTCCCACAAAAAAATACATGACAGCTGTTACTTCAACCCCAACTGTTAATGAAAATGAAGCCAGTACAAGCAAATCTGCTTTTGAACCTGATGATTCTTCAGTGGTAGATAATGAGTTGTGGTCAGAAATGCGAAGACACGAAATGTTAAGGGAAGAGCTGCGACAGAGAAGAAAGCAGCTTGAAGCTTTGATGGCTGAACATCAGAGGAGGCAAGGTCTGGCTGAAACTACATCTCCAGTGGCTGCTTCACTGAGAAGTGATGGGTCTGAGAACCTGTGTACGCCTCAACAGAGTAGAACAGAAAAAACAATGGCAACTTGGGGAGGTTCTACCCAGTGTGCACTAGATGAAGAAGGAGATGAAGATGGTTACCTTTCTGAAGCAGTGGTTCGGACAGATGAAGAAGAGGAGGAGGAGGAGCAAGATGCCAGTTCCAATGATAACTTTGCTGTGTATCCTCCTAACAGTGCAAATCATAACTCTTATAATGTAAAGGAAACTAAAAATAGGTGGAAGAACAATCGCCCTTTTTCAGCAGATGGAAATTATCATCCTTTAGCCAGGACAAGACAGCAGAATATCAGCATGCAGCGTCAGGAAAACCTTCGCTGGGTGTCAGAACTCTCTTATGTAGAAGAGAAAGAACAGTGGCAAGAACAAATCAATCAGCTAAAGAAACAACTTGATTTCAGTGTCAATATTTGTCAGACTTTGATGCAAGACCAGCAGACTCTATCTTGTCTGCTACAAACTCTTCTCACGGGCCCTTACAGTGTTATGCCCAGCAATGTTGCATCTCCTCAAGTACACCTTATAATGCACCAGTTGAACCAGTGCTATACCCAGCTAACATGGCAACAGAATAATGTACAAAGGTTGAAGCAAATGCTAAATGAACTTATGCGCCAACAAAATCATCCAGAAAAACCTGGAAGCAAGGAAAGAGTCAGTAGTGCATCACACCCTCCTTCTCCCAGTTTATTTTGTCCTTTCAGCTTTCCAGCACAGCCTGTAAATCTGTTCAGCCTACCGGGGTTTACTAATTTTTCATCATTTGCACCAGGTATGAATTTCAGCCCTTTATTTCCTTCTAATTTTGGAGATTTTTCTCAAAATATTTCTACACCCACTGAACAGCAGCAACCATTAGCCCAGAATCCTTCAGGGAAAACAGAATACATGGCTTTTCCAAAACCTTTTGAAAGTAGTTCTTCTGTTGGAGCAGAAAAACAAAGGAATCAAAAACAGCCCGAAGAGGAGGTGGAGAACAGTAGGACACCATGGTTATATGACCAAGAAGGTGAAGTAGAAAAACCATTTCTCAAGACTGGATTTGCAGTGTCTGTAGAGAAAACAACAAATAGTCATCACAAAAATCAATTAGATACCAGTAGGAGAAGACGCCAATTTGATGAAGAGTCGTTAGAAAGCTTTAGCAGTATGCCTGACCCAGTAGATCCGACAACAGTAACTAAAACATTCAAGTCAAGAAAAGCATCTGCACAGGCCAGCCTGGCATCTAAAGATAAAACTCCCAAATCAAAGAGTAAGAAGAGGCATTCTACTCAGCTGAAAAGCAGAGTTAAAAATACTGGGTATGAAAGTGCCAGTATGTCTAGCACATGTGAACCTTGCAAAAGTAGGAACAGACATTCAGCCCAGACTGAAGCGCCTGTTCAAGCGAAAGTGTTCAGCAGAAAGAATCATGAGCAGCTGGAAAAAGTAATAAGACATAGTAGGTCTACAGAAATATCGTCAGATTTGAAAAGCTATATTAAAACAAGCTTAAAATTCATCTATCACACTTTTCTATCATGTGAAAGGTTTTATAGTAGAGTTTACAGTACACAGTTCTTGATATCAAGAAGTACCCTGTCTTTACTATTCATACACATTTTATGTTCATCCTTATGTCTGCCCTTTCCTACAGCACATGCTAGGAGAATACTACAGCAGTCTAACAGAAATGCATGCAATGAAGCGCCAGAAACTGGGAGTGATTTTTCCATGTTTGAAGCTTTGCGGGATACCATTTATTCTGAAGTAGCTACGTTGATTTCTCAAAATGAATCTCGTCCACATTTTCTTATTGAACTCTTCCATGAACTTCAGCTACTGAATACAGACTATTTGAGACAGAGGGCTTTATATGCATTGCAGGACATAGTATCCAGACATATTTCTGAGAACCATGAAAAAGAAGGGGAAAACGTAAAGTCAGTGAATTCTGGTACTTGGATAGCATCAAACTCAGAACTTACTCCCAGTGAAAGCCTTGCTACTACTGATGATGAAACTTTTGAGAAGAACTTTGAGAGAGAAACACATAAAATAAGTGAGCAAAATGATGCTGATAATGCTAGTGTCATGTCTGTATCTTCAAATTTTGAGCCTTTTGCAACAGATGATCTGGGTAACACTGTGATTCACTTAGATCAAGCATTAGCCAGAATGAGAGAATATGAGCGTATGAAGACTGAGGCTGAAAGTGACACACATGTCAGATGCACCTGCAGGATTATTGAGGATGAGGATGGTGGTGCTGCTGCCCCGACTACGGTTGATAGTTTAGAAGCGGAAACTCCTATTATTGAAAATCATAGTTCACAGCAACCTGTAAGTGAAGTTTCTACCGTCCCATGTCCTAGAATTGATACGCAGCAACTGGACCGGCAAATTAAAGCAATTATGAAAGAAGTCATTCCCTTTTTGAAGGAGCACATGGATGAAGTATGCTCTTCTCAACTGCTGACGTCAGTGAGACGCATGGTTTTGACTCTCACCCAGCAAAACGATGAGAGCAAAGAGTTTGTAAAGTTCTTCCATAAACAACTTGGAAGTATATTACAGGATTCACTGGCAAAATTTGCTGGCAGAAAACTGAAAGATTGTGGAGAAGATCTTCTTGTAGAGATATCTGAAGTGTTATTTAATGAATTGGCTTTCTTTAAACTCATGCAAGATTTGGATAATAATAGTATAACTGTTAAACAGAGATGCAAAAGGAAAATAGAAGCAGCTGGAGTGATACAGTCTTACGCGAAAGAGGCCAAAAGGATTCTTGAAGGAGATCATGGCTCACCTGCTGGAGAAATTGATGATGAAGACAAAGACAAGGATGAGACTGAAACAGCTAAACAGACTCAAACAGCTGAGGTTTATGATGGTGACGGTCCCAAAAATGTGAGCTCTGATGTCTCTGATCAAGAGGAAGATGAAGAAAGTGAAGAATGTCCAGTGTCTATTACTGAAACTCAGGCTTTGACTAATTATGGAAGTGGAGAAGATGAGAATGAAGATGAAGAAATAGAAGAATTTGAAGAGGGACCTGTAGATGTCCAGACTTCCCTGCAGGCTAACACTGAAACTACAGAAGAAAATGAACACGACGATCAGGTTCCACAGCACGATTTTGAAAAATCAGCGGAAAGCAAAAATGTCCCATCAGAACAAGAACCCACTACTAGTAAAGATGACCAAGATAGCACTCCTGTGAAGCCCTGTTACCTCAATATCTTGGAAAATGAGCAACCTTTAAACAGCACTGTCCAAAAGGACGCTCTTACTACCATCGATTCATCTAATCAGCCTAACGCTTTGCCTTTACCTTTAACTGAAATTGAAACCTTGGTGCCTAGAGTCAAAGAAGTTAAATCTGCCCAGGAAACTCCTGAAAGCTCTTTGGCTGGAAGTCCTGACACTGAATCTCCAGTGTTAGTGAATGACTATGAAGCAGAATCTGGTAACATAAGTCAAAAATCTGATGAAGAAGACTTTGTGAAAGTTGAAGATTTACCACTTAAACTGACAATATATTCAGAGGCAGATCTAAGGAAGAAAATGGTAGAAGAAGAACAGAAAAACCATTTATCTGGTGAAATAATATGTGAAATGCAGACTGAAGAATTAGCTGGGAATTCTCAGACACTAAAAGAACCTGTATTTCTGCACAGCCAATTAAAAATTTGGTTAGAGATAGAAGAGGAAGAAAAGGTCAAACTGATTTTGAAAAGAACAGTGTAA

Related Sequences

bmy_00278T0 Protein

Length: 2195 aa      View alignments
>bmy_00278T0
MATGGXPFEEGMNDQDLPDWSSEGVDDRLNNMDWGGQQKKANRSSEKNKKKFGVESGKRVTNDISPESSPGVGRRRTKTPYTFPHSRYMTQMSVPEQAELEKLKQRINFSDLDQRSIGSDSQGRATAANNKRQLSENRKPFNFLPMQINTNKSKDAAVNPQKREMIGSAQCKELFASALSNDLLQNCQVSEEDGRGEPAMESSQIVSRLVQIRDYITKASSMREDLVEKNERSANVERLTHLIDHLKEQEKSYMKFLQKILARENEEEDVRTVDSAVGSGSVAESTSLNIDVQSEASDTTARDPQQEPMEEIENLKKQHDLLKRMLQQQEQLRALQGRQAALLALQHKAEQAIAVMDDSEKVAGTTPGHHTVPCRQPARSPFHQRVPLRVVTETTGSLSGVSITSELNEELNDLIQRFHNQLPVPDNRRQAESLSLTREVSQSRNPSVSEHLPDEKVQLFSKMRVLQEKKQKMDKLLGELHTLRDEHLNNSSFVPSSASPQRSVDQRSTAAAPSAPVGLTPVVNGESSSLTSSVPYPAASLVSQNQSENEGHLNPTEKLQKLNEVRKRLNELRELVHYYEQTSDMMTDAVNENTKXEETEESEYDSEHENSEPVTNIRNPQVAATWNEVNSNSNAQCVSNNRDGRSVNSNCEINNRSAANIRALNMPPSLADCRYNREREQGIHVAQGEDDEEEEEEAEDEAVSGASLSSHRSSLVDETPEDAEFEQKINRLMAAKQKLRQLQDLVALVQDDDTADQGVISANTSNLDDFYPAEEDTKQNANNTRGNTNKTQKDAGVNEKAREKFYEAKLQQQQRELKQLQEERKKLIEIQEKIQALQKACPDLQLSATSAGNCPTKKYMTAVTSTPTVNENEASTSKSAFEPDDSSVVDNELWSEMRRHEMLREELRQRRKQLEALMAEHQRRQGLAETTSPVAASLRSDGSENLCTPQQSRTEKTMATWGGSTQCALDEEGDEDGYLSEAVVRTDEEEEEEEQDASSNDNFAVYPPNSANHNSYNVKETKNRWKNNRPFSADGNYHPLARTRQQNISMQRQENLRWVSELSYVEEKEQWQEQINQLKKQLDFSVNICQTLMQDQQTLSCLLQTLLTGPYSVMPSNVASPQVHLIMHQLNQCYTQLTWQQNNVQRLKQMLNELMRQQNHPEKPGSKERVSSASHPPSPSLFCPFSFPAQPVNLFSLPGFTNFSSFAPGMNFSPLFPSNFGDFSQNISTPTEQQQPLAQNPSGKTEYMAFPKPFESSSSVGAEKQRNQKQPEEEVENSRTPWLYDQEGEVEKPFLKTGFAVSVEKTTNSHHKNQLDTSRRRRQFDEESLESFSSMPDPVDPTTVTKTFKSRKASAQASLASKDKTPKSKSKKRHSTQLKSRVKNTGYESASMSSTCEPCKSRNRHSAQTEAPVQAKVFSRKNHEQLEKVIRHSRSTEISSDLKSYIKTSLKFIYHTFLSCERFYSRVYSTQFLISRSTLSLLFIHILCSSLCLPFPTAHARRILQQSNRNACNEAPETGSDFSMFEALRDTIYSEVATLISQNESRPHFLIELFHELQLLNTDYLRQRALYALQDIVSRHISENHEKEGENVKSVNSGTWIASNSELTPSESLATTDDETFEKNFERETHKISEQNDADNASVMSVSSNFEPFATDDLGNTVIHLDQALARMREYERMKTEAESDTHVRCTCRIIEDEDGGAAAPTTVDSLEAETPIIENHSSQQPVSEVSTVPCPRIDTQQLDRQIKAIMKEVIPFLKEHMDEVCSSQLLTSVRRMVLTLTQQNDESKEFVKFFHKQLGSILQDSLAKFAGRKLKDCGEDLLVEISEVLFNELAFFKLMQDLDNNSITVKQRCKRKIEAAGVIQSYAKEAKRILEGDHGSPAGEIDDEDKDKDETETAKQTQTAEVYDGDGPKNVSSDVSDQEEDEESEECPVSITETQALTNYGSGEDENEDEEIEEFEEGPVDVQTSLQANTETTEENEHDDQVPQHDFEKSAESKNVPSEQEPTTSKDDQDSTPVKPCYLNILENEQPLNSTVQKDALTTIDSSNQPNALPLPLTEIETLVPRVKEVKSAQETPESSLAGSPDTESPVLVNDYEAESGNISQKSDEEDFVKVEDLPLKLTIYSEADLRKKMVEEEQKNHLSGEIICEMQTEELAGNSQTLKEPVFLHSQLKIWLEIEEEEKVKLILKRTV*