Part of scaffold_3 (Scaffold)

For more information consult the page for scaffold_3 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ASAH1 ENSTTRG00000003428 (Bottlenosed dolphin)

Gene Details

N-acylsphingosine amidohydrolase (acid ceramidase) 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003216, Bottlenosed dolphin)

Protein Percentage 67.01%
cDNA percentage 70.33%
Ka/Ks Ratio 0.59332 (Ka = 0.17, Ks = 0.2865)

ASAH1 ENSBTAG00000011257 (Cow)

Gene Details

Acid ceramidase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014960, Cow)

Protein Percentage 82.15%
cDNA percentage 86.7%
Ka/Ks Ratio 0.51531 (Ka = 0.1207, Ks = 0.2343)

ASAH1  (Minke Whale)

Gene Details

N-acylsphingosine amidohydrolase (acid ceramidase) 1

External Links

Gene match (Identifier: BACU005178, Minke Whale)

Protein Percentage 89.69%
cDNA percentage 91.98%
Ka/Ks Ratio 0.53352 (Ka = 0.0716, Ks = 0.1341)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1290 bp    Location:1254800..1211491   Strand:-
>bmy_00279
ATGCTGGGCTGGAGTCGCCTAACCTTCGTCTTACTGAGCGTGACCGTCACCTGCTCGGTGGCGCAGCATGTGCCACCGGTGGTGGACAGAAGACTGCAGAAAATCAACCTATCCTCCCTCTGGACCAACGTGAGTAAACATCAGATGATCAAGACTCACTCTGACCTTCGTGGAGACTTTTCTCCATGTGATGATCTCATAATAATAATGACAGTGAATAAAAACTTAAGTCATGTCTTCTATCCTGAGACAAATTATTCTTCCCTCAGCTATAGGGGTCCGGTTCCGTGGTACACTATAAATCTCGATTTACCACCATACAAAAGATGGCATGAATTGATGGTTGACAAGGCACCAGCGCTAAAAGTTATAGTGAATTCCCTGAAAAATATGATAAATGCATTTGAGCCAAGTGGAAAAATTGTGCAGTTAGTGGATCAAAAGTTGAGAGTACAGGCTAGTGAGACACCTCCACCCAACCAGCCATTCAGACTCACTCAGACTGTCTGCGGACACTTACGAGAGATTATTTCATTCAATATTTTCTATGAATTTTTTACCATTTGTACTTCAATAATAACAGAAGACAAAGAAGGTCATCTACTACATGCGCGAAACATGGATTTTGGAGTATTTCTTGGGTGGAATGTAAATAATAATACCTGGGTCGTAACTGAGGAACTAAAACCTTTAACAGTGAATTTGGACTTCCAAAGAAACAATAAAACTGTCTTCAAGGCGGCAGGCTTTGCTGGCTATGTGGGCATGTTAACAGGATTCAAACCAGGACTGTTTAGTCTTACGCTCAATGAGCGTTTCAGTACAAATGGCGGTTTTATGGGTGTCATAGAATGGATTTTGGGAAAGAAAGATGCCAAGTGGATAGGTTACGAAGAAGCCAAGRCTATATTGACCAAAACCAAGATATTGGCCCCAGCATACTTTATCCTGGGAGGCAACAAGTCTGGGGAGGGTTGTGTGATTACACGAGACAGAGTACAGTCTTTGGATATATATGAACTCGACCCCAAGCAGGGTATATGGTATGTGGTACAAACAAATTATGACCGTTGGAAAAATCCCTTCTTCCTTGATGATCGCAGAACACCTGCAAAGATGTGTCTAAACCGGACAACCCAAGAGAATATCTCATTTGCAACCATGTACGATGTCCTGTCAACAAAACCTGTCCTCAACAAGCTGACGGTATACACAGCCTTGATAGACGTTACCAAAGGCCAATTTGAAACATACCTGCGGGACTGCCCAGACCCCTGTATAGGTTGGTGA

Related Sequences

bmy_00279T0 Protein

Length: 430 aa      View alignments
>bmy_00279T0
MLGWSRLTFVLLSVTVTCSVAQHVPPVVDRRLQKINLSSLWTNVSKHQMIKTHSDLRGDFSPCDDLIIIMTVNKNLSHVFYPETNYSSLSYRGPVPWYTINLDLPPYKRWHELMVDKAPALKVIVNSLKNMINAFEPSGKIVQLVDQKLRVQASETPPPNQPFRLTQTVCGHLREIISFNIFYEFFTICTSIITEDKEGHLLHARNMDFGVFLGWNVNNNTWVVTEELKPLTVNLDFQRNNKTVFKAAGFAGYVGMLTGFKPGLFSLTLNERFSTNGGFMGVIEWILGKKDAKWIGYEEAKXILTKTKILAPAYFILGGNKSGEGCVITRDRVQSLDIYELDPKQGIWYVVQTNYDRWKNPFFLDDRRTPAKMCLNRTTQENISFATMYDVLSTKPVLNKLTVYTALIDVTKGQFETYLRDCPDPCIGW*