Part of scaffold_3 (Scaffold)

For more information consult the page for scaffold_3 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FRG1 ENSTTRG00000003429 (Bottlenosed dolphin)

Gene Details

FSHD region gene 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003217, Bottlenosed dolphin)

Protein Percentage 99.6%
cDNA percentage 98.52%
Ka/Ks Ratio 0.02692 (Ka = 0.0017, Ks = 0.0638)

FRG1 ENSBTAG00000007089 (Cow)

Gene Details

protein FRG1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009325, Cow)

Protein Percentage 98.79%
cDNA percentage 94.76%
Ka/Ks Ratio 0.02007 (Ka = 0.0053, Ks = 0.2617)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 747 bp    Location:1289766..1274137   Strand:-
>bmy_00280
ATGGCCGAATACTCCTACGTGAAGCCCACCAAACTCGTACTCAAAGGAACCAAGGCCAAGAGTAAGAAGAAAAAGAGCAAAGAGAAGAAGAGAAAAAGAGAAGAAGATGAAGAAATTCAACTTGATATTGTTGGAATCTGGTGGACAGTAACAAACTTCGGTGAAATTTCAGGAACCATAGCGATCGAAATGGATAAAGGAACCTACATACATGCACTTGACAATGGACTTTTTACACTGGGAGCTCCACATAAAGAAGTTGATGAGGGTCCTAGTCCTCCAGAGCAAATTGCCCTGAAATCTGGCTATGGAAAATACCTTGGTATAAATTCAGATGGACTTGTTGTTGGGCGTTCAGATGCAATTGGACCAAGAGAACAATGGGAACCGGTCTTTCAAGATGGGAAAATGGCTTTACTGGCCTCAAATAGCTGTTTTATTAGATGCAATGAAGCAGGTGATATAGAAGCAAAAAGTAAAACGGCAGGAGAAGAAGAAATGATAAAGATTAGATCCTGTGCTGAAAGAGAAACTAAGAAAAAAGATGATATTCCAGAAGAAGACAAAGGAAATGTTAAACAGTGTGAACTCAATTATGTAAAGAAATTCCAGAGCTTCCAAGACCACAAACTTAAAATAAGTAAAGAAGACAGTAAAATCCTTAAAAAGGCCCGGAAAGATGGATTTTTGCATGAAACACTTCTGGACAGGAGAGCCAAACTGAAAGCTGATAGATATTGCAAATGA

Related Sequences

bmy_00280T0 Protein

Length: 249 aa      View alignments
>bmy_00280T0
MAEYSYVKPTKLVLKGTKAKSKKKKSKEKKRKREEDEEIQLDIVGIWWTVTNFGEISGTIAIEMDKGTYIHALDNGLFTLGAPHKEVDEGPSPPEQIALKSGYGKYLGINSDGLVVGRSDAIGPREQWEPVFQDGKMALLASNSCFIRCNEAGDIEAKSKTAGEEEMIKIRSCAERETKKKDDIPEEDKGNVKQCELNYVKKFQSFQDHKLKISKEDSKILKKARKDGFLHETLLDRRAKLKADRYCK*