Part of scaffold_3 (Scaffold)

For more information consult the page for scaffold_3 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIML1 ENSTTRG00000012639 (Bottlenosed dolphin)

Gene Details

tripartite motif family-like 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011992, Bottlenosed dolphin)

Protein Percentage 90.38%
cDNA percentage 95.58%
Ka/Ks Ratio 1.00599 (Ka = 0.0457, Ks = 0.0455)

TRIML1 ENSBTAG00000008639 (Cow)

Gene Details

probable E3 ubiquitin-protein ligase TRIML1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011393, Cow)

Protein Percentage 92.03%
cDNA percentage 91.88%
Ka/Ks Ratio 0.15271 (Ka = 0.0384, Ks = 0.2511)

TRIML1  (Minke Whale)

Gene Details

tripartite motif family-like 1

External Links

Gene match (Identifier: BACU005175, Minke Whale)

Protein Percentage 97.65%
cDNA percentage 98.72%
Ka/Ks Ratio 0.47854 (Ka = 0.0097, Ks = 0.0203)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1407 bp    Location:2650356..2644843   Strand:-
>bmy_00284
ATGTCTACAGCAGATTTGATGGAGAATCTCAGGGAGGAACTGACCTGTTTCATCTGCTTGGACTATTTCACCAGCCCAGTGACCACCGAGTGTGGGCACAGCTTTTGTCTGGCGTGTCTCTTGAGAAGCTGGGAGGAACATAACACTCCTTTATCTTGTCCTGAGTGCTGGAGGACCTTGGAGATCCCACATTTCCAGCCCAATGAGCGTCTGGGGAGGCTGGCTGGCATCGGCAAGCAGCTCAGATCCCAGGTGCTGCAGAGTGAGGGCAACCAAGGCAGCTATGAGAGAATGCTAGCTGCCACTAAGTTGTTGTCTGATGATGTGCAGGGTGTAAACGATTTCTCAACCCAAGGTCATGGAATAAACAGAATGAATCTCTCGAATGAGGCTGAGGAGCATCATAAAGAGAAACTCCAGGAAATCCTAAATATTTTGCGTAAAAAGAAAAACGAAACTCAGGTTATATTAACCCATGAGAAGGAGAGAGTGATATTGTGTAAGGAAGAGACAAACACCTGTAAACAGGTTGTTGTGTCAGAATATGCAAAAATGCACCAGTTCCTGAAGGAGGAGGAGCAGCTGCAGCTCCAGTTACTGGAAATGGAGGAAAGAGAGAACCTGAAGAAACTGAGGGACAATGAGATCAAGCTGACCCAGCAAGTACGAAGCCTGAGCAAAACGATTGGACAGATAGAGTCTATGTGTCAGAACTCGATCATAGAGTCATTTGAGGATGTGAGAGGAATACTGAAAAGGAGTAAGCCACTCTTGCTTCAGTGTCCAGAGGCCATCAACACGGAACTGACTCTGTGCCACATCACTGGAATGAGGGAGATGCTAAGAAAATTTAGCACGGATATAACTCTAGATCCAGCCACGGCCAATGCCTATCTTGTCTTSTCTGAGGATCTGAAAAGTGTGAGACATGGAGGAATCCGGCAGCAGTTGCCTGACAACCCCGAAAGATTTGACCAATCTGCAACGGTGCTGGGCGCTCAGATCTTCACCTGCGGGAGACACTACTGGGAGGTGGAAGTGGGCAACAAGACTGAGTGGGAGGTGGGCATCTGCAAGGACTCAGTGAGCAGAAAGGGGAATCTCCCCAAGCCACCGGGGGACCTCTTCTCACTTATAGGCTTAAAAATTGGAGATGATTATAGTCTTTGGGTCTCATCACCTTTGAAAGGCCAACATGTTAGAGCGCCAGTGCATAAGGTTGGTGTTTTCTTAGACTATGAGTCCGGACACATAGCATTCTACAATGTGACAGACGAGTCCCTTATCTACAGTTTCCCTCCAACCTCTTTCCAAGAGGCTCTCAGGCCCATCTTCTCCCCTTGTCTCCCAAATGAAGGGACAAACACAGGCCCTCTTTCCATCTGCTCCTTGAATAAGCATGTCTGA

Related Sequences

bmy_00284T0 Protein

Length: 469 aa      View alignments
>bmy_00284T0
MSTADLMENLREELTCFICLDYFTSPVTTECGHSFCLACLLRSWEEHNTPLSCPECWRTLEIPHFQPNERLGRLAGIGKQLRSQVLQSEGNQGSYERMLAATKLLSDDVQGVNDFSTQGHGINRMNLSNEAEEHHKEKLQEILNILRKKKNETQVILTHEKERVILCKEETNTCKQVVVSEYAKMHQFLKEEEQLQLQLLEMEERENLKKLRDNEIKLTQQVRSLSKTIGQIESMCQNSIIESFEDVRGILKRSKPLLLQCPEAINTELTLCHITGMREMLRKFSTDITLDPATANAYLVXSEDLKSVRHGGIRQQLPDNPERFDQSATVLGAQIFTCGRHYWEVEVGNKTEWEVGICKDSVSRKGNLPKPPGDLFSLIGLKIGDDYSLWVSSPLKGQHVRAPVHKVGVFLDYESGHIAFYNVTDESLIYSFPPTSFQEALRPIFSPCLPNEGTNTGPLSICSLNKHV*