Part of scaffold_3 (Scaffold)

For more information consult the page for scaffold_3 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ZFP42 ENSTTRG00000012630 (Bottlenosed dolphin)

Gene Details

ZFP42 zinc finger protein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011983, Bottlenosed dolphin)

Protein Percentage 94.0%
cDNA percentage 96.89%
Ka/Ks Ratio 0.55476 (Ka = 0.0257, Ks = 0.0464)

ZFP42 ENSBTAG00000044139 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053629, Cow)

Protein Percentage 79.05%
cDNA percentage 87.84%
Ka/Ks Ratio 0.66898 (Ka = 0.1186, Ks = 0.1773)

ZFP42  (Minke Whale)

Gene Details

ZFP42 zinc finger protein

External Links

Gene match (Identifier: BACU005173, Minke Whale)

Protein Percentage 98.0%
cDNA percentage 99.0%
Ka/Ks Ratio 0.72253 (Ka = 0.008, Ks = 0.0111)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 903 bp    Location:2768207..2767305   Strand:-
>bmy_00287
ATGGACCAGAAACTGAAGAAAAGGGAAAAGACACGTGGCCAGAAAGGGCTTGGTAGAAGAGCTGTCAGTGGGGACAAGTCACCACCAGCCCAGCAGGAACCTCCTGACACAATGTGGACCTCATGTGATGAGGATGTGTGCTATGAGACTAGCTTTCGGGTTGTTGAAGAGGATTCCTTCTCTGACTGTTATATAGAATGCATAATAAGAGGTGAGTTTTCTGAACCTATCACGGAAGAGGACTCACTTCTTAAGTCCTTTGACTGTCTGAAAGAAGGATCAGAACAAGAGCTTTCTCAACAGGCTCTTACGGCAAGCTCACTTCTTGAACGTTCCTTGGAATACATGAAAAAGGGGGCAAAACAAGAACTTCCTCAACAGTTTGGTGGAGAGAATTCACTTCTTGAGTCTTCTGAGTACATGACAGGCAAGAAGCTTCCTCCTGGAGAAATACCCAGCACTGACTTTTCAGATCCTCAACAGCTCACAGCATGCACTAAAATGAAGCCAAGTACAAATAAAGAATATGATGCTCCAGAAAAAATTGTTTGTCCTCAGAGTGGATGCATAAGAGAGTTCAAGAATAGAGCATCCCTGAGAAAGCATCTCCGGGTTCATAGTCCCCGAGATCACRTATGTGCAGAATGTGGGAAAGCCTTCAAGGAGAGTGCAAAACTAAAAAGACATTTTCTGGTTCATACTGGAGAGAAGCCATTTCCGTGTACTTTTGAAGGGTGCGGAAAACGTTTTTCCCTGTCCTTCAATTTGCGTACACATGTGCGCATCCACACTGGGGAGAAACCTTTTGTATGTCCCTTTGAAGGCTGTCGCAAGAAGTTTATTCAGTCAAATAACATGAAAGCGCACCTCTTAACTCATGCAAAGGCCGAAATGAATCAGTGA

Related Sequences

bmy_00287T0 Protein

Length: 301 aa      View alignments
>bmy_00287T0
MDQKLKKREKTRGQKGLGRRAVSGDKSPPAQQEPPDTMWTSCDEDVCYETSFRVVEEDSFSDCYIECIIRGEFSEPITEEDSLLKSFDCLKEGSEQELSQQALTASSLLERSLEYMKKGAKQELPQQFGGENSLLESSEYMTGKKLPPGEIPSTDFSDPQQLTACTKMKPSTNKEYDAPEKIVCPQSGCIREFKNRASLRKHLRVHSPRDHXCAECGKAFKESAKLKRHFLVHTGEKPFPCTFEGCGKRFSLSFNLRTHVRIHTGEKPFVCPFEGCRKKFIQSNNMKAHLLTHAKAEMNQ*