Part of scaffold_3 (Scaffold)

For more information consult the page for scaffold_3 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TLR3 ENSTTRG00000015619 (Bottlenosed dolphin)

Gene Details

toll-like receptor 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014796, Bottlenosed dolphin)

Protein Percentage 95.91%
cDNA percentage 97.35%
Ka/Ks Ratio 0.50361 (Ka = 0.0159, Ks = 0.0315)

TLR3 ENSBTAG00000008682 (Cow)

Gene Details

toll-like receptor 3 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011445, Cow)

Protein Percentage 89.16%
cDNA percentage 91.11%
Ka/Ks Ratio 0.28046 (Ka = 0.0556, Ks = 0.1984)

TLR3  (Minke Whale)

Gene Details

toll-like receptor 3

External Links

Gene match (Identifier: BACU005168, Minke Whale)

Protein Percentage 96.24%
cDNA percentage 97.64%
Ka/Ks Ratio 0.82624 (Ka = 0.0203, Ks = 0.0246)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2844 bp    Location:4048816..4021378   Strand:-
>bmy_00299
ATGCTGAAGACAGAGGTTGGCCACAAGCACAACATCCCAGCCTTCCAGAATTTAGAAGAGAAGCAGCCCAGCATATGGATAGGGGAAGTTCAAGTTCAGTCCTGCTCAGTGGACATGAGCAAAATCATGAGCAGKTATTTGCTTTATCGTATCTACTCCTTTTTGGGACTGTTGCCCTTTTGGATACTGTGTACATCTTCTACCAACAAATGTACTGTTAGACATGAAATAGCTGACTGCAGTCATCTGAAGTTGACTCAAATACCTGATGACCTCCCAACAAACATAACAGTGTTGAATCTTACCCATAATCAACTCAGAAGATTACCACCTGCCAATTTTACAAGATATAGCCAACTTACTATCTTGGATGGAGGATTTAACTCCATCTCAAAGCTGGAGCCAGAATTGTGCCAAAGTCTCCCTTTGTTGGAAATTTTGAACCTCCAACACAATGAGCTATCTCAGCTTTCTGATAAAACCTTTATCTTCTGCATGAATTTGACTGAACTCCATCTAATGTCCAACTCAATCCAGAAAATTCAAAATAATCCCTTTAAAAACCTGAAGAATTTAATCAAATTAGACCTAGCTCATAATGGTTTATCATCTACTAAATTAGGAACTCAGCTGCAACTGGAAAATCTCCARGAGCTTCTACTATCAAATAATAAAATTTCTGCACTAAGACGTGAAGAACTTGATTTCCTKGGCAACACTTCTTTAAAAAGTTTAGAGTTGTCATCAAACCAAATAACGGAGTTCTCTCCAGGGTGTTTTCATGCAATTGGAAAATTATTTGGCTTCTCTCTGAACAATGCCAAACTGAGCCCCAGTCTCATAGAAGAGCTCTGCTTGGAATTATCAAACACARGCATTCAGAATCTGTCCCTSAGCAACAACCAGCTGTACACAACCAGCAACACGACTTTTGTTGGGCTGAAGCAGACAAATCTCACAGTGCTCGATCTTTCCCATAACAGCTTAAGTGTGATTGGTAATGATTCCTTTGCTTGGCTTCCACATCTAGAATATCTCTTTCTGGAGTATAATAATATASAACATCTGTCTTCTCGCTCTTTTTATGGGCTTTCCAATGTGAGATACCTGAATTTGAGACGATCTTTTACTAAACAAAGCGTTTCCCTGGCTTCACTTCCCAAGATTGATGATTTTTCCTTTCAGTGGCTAAAATTTTTGGAGTATCTCAATATGGAAGATAACAACTTTCCAGGCATAAAAAGCAATACTTTCACGGGATTGACAAGGCTGAGATGTTTAAGTCTATCCAACTCCTTCTCAAGTTTGCGAACTTTAACAAATGAAACATTTTTATCACTTGCTGGTTCTCCTCTGCTCGTACTCAACCTAACCAAAAATAAAATCTCAAAAATAGAGAGTGGTGCTTTTTCTTGGTTGGGCCACCTAAATGTACTTGACCTTGGCCTTAATGAAATTGGGCAAGAACTCACAGGCCAGGAATGGAGAGGTCTAGAAAATATTGTTGAAATCTACCTTTCCTACAACAAATACCTAGAGCTGACTAGCAACTCTTTTGCCTTGGTTCCAAGCCTTCAACGACTGATGCTCCGAAGGGTGGCCCTTAAAAATGTGGATAGCTCCCCTTCACCTTTTCACCCTCTTCCTAACCTGACCATTCTGGATCTAAGCAACAACAACATAGCCAACATAAATGATGAACTGTTGAAGGGTCTTGAGAAACTAGAAATTCTGGATTTGCAGCATAACAACTTAGCTCGCCTCTGGAAGCATGCAAACCCTGGCGGTCCTGTTCATTTTCTGAAGGGTCTTTCTCACCTCTACATCCTTAACTTAGAGTCTAATGGCTTTGATGAGATCCCAGCAGAAGTCTTCAAGGACTTACGTGAATTGAAGAGCATCGATTTAGGATTGAATAATTTAAATATCCTTCCACCATCTGTCTTTGATAATCAAGTGTTGCTAAAGTCATTAARCCTTCAGAAGAATCTCATAACATCTGTTGAAAAGAACGTTTTTGGGCCAGCATTCAAGAACCTGAGTAATTTAGATATGCGCTTTAATCCATTTGATTGTACATGTGAAAGCATTGCCTGGTTTGTTAATTGGATTAATAATACCCATACCAACATCTCTGAACTATCAAGCCGTTACCTCTGCAACACTCCACCTCAATATCGTGGTTTCCCAGTGATGCTTTTTGATATATCACCCTGCAAAGACAGTGCCCCATTTGAACTCCTTTTCATGATAAATACAAGTATCCTATTGATTTTCATCTTTATTGTACTTCTCATCCATTTTGAAGGCTGGAAGATATCTTTTTATTGGAATGTTTCAGTGCATCGAGTTCTTGGTTTCAAAGAAATAGACAGACAGCCAGAACAGTTTGAATATGCGGCATATATAATTCATGCCTATAAAGATAGGGATTGGGTCTGGGAACACTTCTCCCCGATGGAAGAAGAAGATCATACACTCAGATTCTGTCTGGAAGAAAGGGATTTTGAGGCAGGTGTCCTTGAACTTGAAGCAATTGTTAATAGCATCAGAAGGAGCAGAAAAATTATTTTTGTTATAACACAGAATCTACTGAAAGATCCATTATGCAAAAGATTCAAGGTGCACCACGCAGTTCAGCAAGCTATTGAACAAAATCTGGATTCCATTATATTGATCTTTCTTGAGGATATTCCGGATTATAAACTGAATCATGCGCTCTGTTTGCGAAGAGGGATGTTTAAATCTCRCTGCATCTTGAACTGGCCGATTCAGAAAGAACGGGTAAATGCCTTTCATCATAAATTGCAAGTAGCACTTGGTTCCAGAAATTCAGTACATTAA

Related Sequences

bmy_00299T0 Protein

Length: 948 aa      View alignments
>bmy_00299T0
MLKTEVGHKHNIPAFQNLEEKQPSIWIGEVQVQSCSVDMSKIMSXYLLYRIYSFLGLLPFWILCTSSTNKCTVRHEIADCSHLKLTQIPDDLPTNITVLNLTHNQLRRLPPANFTRYSQLTILDGGFNSISKLEPELCQSLPLLEILNLQHNELSQLSDKTFIFCMNLTELHLMSNSIQKIQNNPFKNLKNLIKLDLAHNGLSSTKLGTQLQLENLQELLLSNNKISALRREELDFLGNTSLKSLELSSNQITEFSPGCFHAIGKLFGFSLNNAKLSPSLIEELCLELSNTXIQNLSLSNNQLYTTSNTTFVGLKQTNLTVLDLSHNSLSVIGNDSFAWLPHLEYLFLEYNNIZHLSSRSFYGLSNVRYLNLRRSFTKQSVSLASLPKIDDFSFQWLKFLEYLNMEDNNFPGIKSNTFTGLTRLRCLSLSNSFSSLRTLTNETFLSLAGSPLLVLNLTKNKISKIESGAFSWLGHLNVLDLGLNEIGQELTGQEWRGLENIVEIYLSYNKYLELTSNSFALVPSLQRLMLRRVALKNVDSSPSPFHPLPNLTILDLSNNNIANINDELLKGLEKLEILDLQHNNLARLWKHANPGGPVHFLKGLSHLYILNLESNGFDEIPAEVFKDLRELKSIDLGLNNLNILPPSVFDNQVLLKSLXLQKNLITSVEKNVFGPAFKNLSNLDMRFNPFDCTCESIAWFVNWINNTHTNISELSSRYLCNTPPQYRGFPVMLFDISPCKDSAPFELLFMINTSILLIFIFIVLLIHFEGWKISFYWNVSVHRVLGFKEIDRQPEQFEYAAYIIHAYKDRDWVWEHFSPMEEEDHTLRFCLEERDFEAGVLELEAIVNSIRRSRKIIFVITQNLLKDPLCKRFKVHHAVQQAIEQNLDSIILIFLEDIPDYKLNHALCLRRGMFKSXCILNWPIQKERVNAFHHKLQVALGSRNSVH*