Part of scaffold_3 (Scaffold)

For more information consult the page for scaffold_3 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCDC110 ENSTTRG00000012170 (Bottlenosed dolphin)

Gene Details

coiled-coil domain containing 110

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011537, Bottlenosed dolphin)

Protein Percentage 92.43%
cDNA percentage 95.62%
Ka/Ks Ratio 0.70328 (Ka = 0.0404, Ks = 0.0574)

CCDC110 ENSBTAG00000017157 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022809, Cow)

Protein Percentage 87.59%
cDNA percentage 91.85%
Ka/Ks Ratio 0.38221 (Ka = 0.0659, Ks = 0.1724)

CCDC110  (Minke Whale)

Gene Details

coiled-coil domain containing 110

External Links

Gene match (Identifier: BACU007191, Minke Whale)

Protein Percentage 96.69%
cDNA percentage 98.29%
Ka/Ks Ratio 0.60938 (Ka = 0.0155, Ks = 0.0254)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2694 bp    Location:4508730..4520366   Strand:+
>bmy_00303
TCGGAGCAGCCCGGCCCACCGCCGCGGCGTGGCCCCAGCGCGCCCTCCCGTGGCCGCTCAGCGCGCCCGCGTCCCGAATCCCCACGCCTCGCCTCCTTTCTCCCAGCAAAACCAAAAGCCACGTACTGTTCTGTTACAGAAAAGAATCCTGAGGAAGAGGAGGAGGTTGACTGCGTTCTCCTTTCAGCACCCAAGATCCTAAATTCCTCTGAGGGGGTAAAGGAAAATGGTGGCAGTGAAATAGAATACGGCTGCATAACAGAATCAGAAAATCAAATCCAACCACAATCAGCACTGAAAGCCCTTCAGCATCAGCTGGAATCATTTCAGGCTCTCCGAATGCAGACTTTGCAGAATGTTAGCATGGTGCAGTCTGAAATCAGTGAAATACTGAACAAAAGTATTACTGAAGTAGAAAACCCACAATTTAGCTCAGAAAAAAATCTAGTATTCAGCACACGCAATGAAAAAGCTTTGGGCGACTGGATTGTCAAAAATGAAAATAAGGAAACTCCTGTCCTGAAAACCCTAAAAGATGTGCGTTTACCTCTGTACTTCTGCAATTTTCTTCCTATAGAGAATCAAGAAGAAACCCTTTCTATGGAGAAAATTCAGCATTTTGAGGATCCTAGGACTCTTCATTCAGTAGAAGAAATATTCAGTAGTGATAGTGTTAACAGTCTCTCTCAAGGTATAAATATCCCATGCCAGATACATTTCAAGGACATATTAACTTCGACAGATAACTCAGCTTCAGAAAATTCTGACTTGAAGAATTATAATAACCTTTATAATTTCCTACCTAATGTACCTCAAAACGGGATGTCTCAAGCTGATATGGTAATTGTGGATAAGTCCAGAATTACTGTGCCTTTTCTCAAGCATGGATTTTGTGAAAATTTAGATGATATTTGCCATTCTATCAAACAAATGAAGGAAGAGCTTCAAAAGTCACATGATAGGGAACTGGCACTTACAAATGAACTGCAAACTTTAAAAGCTATTCCAAGGAATGGTAACTATGACCTGCCCCCCACTCACAAGGAAAAAATTAACTTTATTAAGGAAGAAAATATTGAAAGTAACTTAAATGAAGATACAAAATCAAAGAGAATTTCGGAATTAGAGGCACTAGTAAACAAATTACTCCCACTTAGGGAAACAGTGTCAAAATTCCATGTGAATTTTTGTAGGAAATGTAAAAAACTATCTAAGAGTGAAATACACAGGGGGGGAAAGAATGAGAAAAATAATAAAGAAATTCCTATCACTGACAAGAATATTGCAGATTTAAAACTCCATTCCAGAGTTCCAAGACATACACTGGCATTCTTTGACCCAACAAAATATGCAATGAAAGACAAAGAAAGACAACCATTTGCAGTAAAACAAGGATCAATAATATTTGAAAATGAGAAGACATCCAAAGTCAATTCTGTTACTGAGCAGTGTGTAGCAAAAATTCAGTACTTACAGAATTACCTGAAAGAATCTATGCAGATACAGAAAAAAGTAATGAAACTGGAGAATGAAAACCTAACCCTTAAAATGAAAATTAAACCTCTTGTCTTTATCACACAATCTCTGATACAGAAAATTGAAATGTATGAAAAACAACTTAAGACATTGGTTGAAGAAAAGAACACTATTCAGTCCAAGTTAATTAAAACAGAAGAAGATGGCAAAGAATGTCTTAAAGAATTGAAAGAAATAATTAGTAACTATAATGTTCTCCAAGGACAAAATAAAACCCTAGAGGAAAAAAACAGTCAACTTTCTTTGGAGAAGCAACAAATGATAGAAACATTAGAACAACTAAAAAGTAAGGAACACCAAACTCAAAGTGACATGGCCATTGTCAATAATGAAAATAAACTACTGATCACAGAAATGGAATCAATGAAAACAAATATTCTATTGATACAAGAGGAAAAAGAAATGTTAGAGGAAAAAACATACCAGCTTCTAAAGGAAAAAGGCTCACTTGAAAATGAACAAAAAGAAAACCAGCTAGAGATAATGCAGCTAAAAGAGAAAGAAAGATTGGCAAAAACTGAACAAGAGACACTTCTTCAAATAATAGAAACAGTTAAAAATGAAAAGCTTAATCTTGAAACAACCTTACAAGAATCTACTGCTGCAAGAGAAATGATGGAAAGAGAAATTGAGGATATTCAAACATACCAATCTACCGCCAAAGAGAATTTTCTGCAAGAAATAAAAAATGCAAAATCAGAAGCAAGTATTTATAAGAATAGTTTGTTAGAAATGGGCAACGAATGTGAAATGTTATCAAAAATGTTAATGGAAATTAAAACTGATAATCAGATTCTAAAAGAAGAACTAAAAAAACATAGTCAAGAAAGTATAAAATTTGAAAACACCATCAGTAGACTTGAGGAAGACAAAATACTTTTAGAAAACTATGTAAGAAGTATAGAGAATGAAAGGGATACCTTGGAATTTGAGATGCGGAATCTTCAAAGAGAATATTTAAATCTAAGTGAAAAAATCTATAATCATCATATTGACCTATCAAAAATGGGTTACATTTCAAGAAGAGAGAAATTCCATCTTGACATCTATGATATATATGAAGACACCTCTAGTCCTAGGAGCAGGCCTTTAGCCCCTGATTTGAAAGGAATTCCAAGTAAACCATATCAATTGCTTCCATCCAAGCCATGTAAATAA

Related Sequences

bmy_00303T0 Protein

Length: 898 aa      View alignments
>bmy_00303T0
SEQPGPPPRRGPSAPSRGRSARPRPESPRLASFLPAKPKATYCSVTEKNPEEEEEVDCVLLSAPKILNSSEGVKENGGSEIEYGCITESENQIQPQSALKALQHQLESFQALRMQTLQNVSMVQSEISEILNKSITEVENPQFSSEKNLVFSTRNEKALGDWIVKNENKETPVLKTLKDVRLPLYFCNFLPIENQEETLSMEKIQHFEDPRTLHSVEEIFSSDSVNSLSQGINIPCQIHFKDILTSTDNSASENSDLKNYNNLYNFLPNVPQNGMSQADMVIVDKSRITVPFLKHGFCENLDDICHSIKQMKEELQKSHDRELALTNELQTLKAIPRNGNYDLPPTHKEKINFIKEENIESNLNEDTKSKRISELEALVNKLLPLRETVSKFHVNFCRKCKKLSKSEIHRGGKNEKNNKEIPITDKNIADLKLHSRVPRHTLAFFDPTKYAMKDKERQPFAVKQGSIIFENEKTSKVNSVTEQCVAKIQYLQNYLKESMQIQKKVMKLENENLTLKMKIKPLVFITQSLIQKIEMYEKQLKTLVEEKNTIQSKLIKTEEDGKECLKELKEIISNYNVLQGQNKTLEEKNSQLSLEKQQMIETLEQLKSKEHQTQSDMAIVNNENKLLITEMESMKTNILLIQEEKEMLEEKTYQLLKEKGSLENEQKENQLEIMQLKEKERLAKTEQETLLQIIETVKNEKLNLETTLQESTAAREMMEREIEDIQTYQSTAKENFLQEIKNAKSEASIYKNSLLEMGNECEMLSKMLMEIKTDNQILKEELKKHSQESIKFENTISRLEEDKILLENYVRSIENERDTLEFEMRNLQREYLNLSEKIYNHHIDLSKMGYISRREKFHLDIYDIYEDTSSPRSRPLAPDLKGIPSKPYQLLPSKPCK*