Sequence detailsbmy_00303 (Coding sequence)

Part of scaffold_3 (SequenceType object (1))

For more information consult the page for scaffold_3 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCDC110ENSTTRG00000012170 (Bottlenosed dolphin)

Gene Details

coiled-coil domain containing 110

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011537, Bottlenosed dolphin)

Protein Percentage 92.43%
cDNA percentage 95.62%
Ka/Ks Ratio 0.70328 (Ka = 0.0404, Ks = 0.0574)

CCDC110ENSBTAG00000017157 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000022809, Cow)

Protein Percentage 87.59%
cDNA percentage 91.85%
Ka/Ks Ratio 0.38221 (Ka = 0.0659, Ks = 0.1724)

CCDC110 (Minke Whale)

Gene Details

coiled-coil domain containing 110

External Links

Gene match (Identifier: BACU007191, Minke Whale)

Protein Percentage 96.69%
cDNA percentage 98.29%
Ka/Ks Ratio 0.60938 (Ka = 0.0155, Ks = 0.0254)

Additional orthologs identified in other species via the OPTIC pipeline.

CCDC110 (Human)   Ccdc110 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2694 bp    Location:4508730..4520366   Strand:+
Raw sequence 
>bmy_00303
TCGGAGCAGCCCGGCCCACCGCCGCGGCGTGGCCCCAGCGCGCCCTCCCGTGGCCGCTCAGCGCGCCCGCGTCCCGAATCCCCACGCCTCGCCTCCTTTCTCCCAGCAAAACCAAAAGCCACGTACTGTTCTGTTACAGAAAAGAATCCTGAGGAAGAGGAGGAGGTTGACTGCGTTCTCCTTTCAGCACCCAAGATCCTAAATTCCTCTGAGGGGGTAAAGGAAAATGGTGGCAGTGAAATAGAATACGGCTGCATAACAGAATCAGAAAATCAAATCCAACCACAATCAGCACTGAAAGCCCTTCAGCATCAGCTGGAATCATTTCAGGCTCTCCGAATGCAGACTTTGCAGAATGTTAGCATGGTGCAGTCTGAAATCAGTGAAATACTGAACAAAAGTATTACTGAAGTAGAAAACCCACAATTTAGCTCAGAAAAAAATCTAGTATTCAGCACACGCAATGAAAAAGCTTTGGGCGACTGGATTGTCAAAAATGAAAATAAGGAAACTCCTGTCCTGAAAACCCTAAAAGATGTGCGTTTACCTCTGTACTTCTGCAATTTTCTTCCTATAGAGAATCAAGAAGAAACCCTTTCTATGGAGAAAATTCAGCATTTTGAGGATCCTAGGACTCTTCATTCAGTAGAAGAAATATTCAGTAGTGATAGTGTTAACAGTCTCTCTCAAGGTATAAATATCCCATGCCAGATACATTTCAAGGACATATTAACTTCGACAGATAACTCAGCTTCAGAAAATTCTGACTTGAAGAATTATAATAACCTTTATAATTTCCTACCTAATGTACCTCAAAACGGGATGTCTCAAGCTGATATGGTAATTGTGGATAAGTCCAGAATTACTGTGCCTTTTCTCAAGCATGGATTTTGTGAAAATTTAGATGATATTTGCCATTCTATCAAACAAATGAAGGAAGAGCTTCAAAAGTCACATGATAGGGAACTGGCACTTACAAATGAACTGCAAACTTTAAAAGCTATTCCAAGGAATGGTAACTATGACCTGCCCCCCACTCACAAGGAAAAAATTAACTTTATTAAGGAAGAAAATATTGAAAGTAACTTAAATGAAGATACAAAATCAAAGAGAATTTCGGAATTAGAGGCACTAGTAAACAAATTACTCCCACTTAGGGAAACAGTGTCAAAATTCCATGTGAATTTTTGTAGGAAATGTAAAAAACTATCTAAGAGTGAAATACACAGGGGGGGAAAGAATGAGAAAAATAATAAAGAAATTCCTATCACTGACAAGAATATTGCAGATTTAAAACTCCATTCCAGAGTTCCAAGACATACACTGGCATTCTTTGACCCAACAAAATATGCAATGAAAGACAAAGAAAGACAACCATTTGCAGTAAAACAAGGATCAATAATATTTGAAAATGAGAAGACATCCAAAGTCAATTCTGTTACTGAGCAGTGTGTAGCAAAAATTCAGTACTTACAGAATTACCTGAAAGAATCTATGCAGATACAGAAAAAAGTAATGAAACTGGAGAATGAAAACCTAACCCTTAAAATGAAAATTAAACCTCTTGTCTTTATCACACAATCTCTGATACAGAAAATTGAAATGTATGAAAAACAACTTAAGACATTGGTTGAAGAAAAGAACACTATTCAGTCCAAGTTAATTAAAACAGAAGAAGATGGCAAAGAATGTCTTAAAGAATTGAAAGAAATAATTAGTAACTATAATGTTCTCCAAGGACAAAATAAAACCCTAGAGGAAAAAAACAGTCAACTTTCTTTGGAGAAGCAACAAATGATAGAAACATTAGAACAACTAAAAAGTAAGGAACACCAAACTCAAAGTGACATGGCCATTGTCAATAATGAAAATAAACTACTGATCACAGAAATGGAATCAATGAAAACAAATATTCTATTGATACAAGAGGAAAAAGAAATGTTAGAGGAAAAAACATACCAGCTTCTAAAGGAAAAAGGCTCACTTGAAAATGAACAAAAAGAAAACCAGCTAGAGATAATGCAGCTAAAAGAGAAAGAAAGATTGGCAAAAACTGAACAAGAGACACTTCTTCAAATAATAGAAACAGTTAAAAATGAAAAGCTTAATCTTGAAACAACCTTACAAGAATCTACTGCTGCAAGAGAAATGATGGAAAGAGAAATTGAGGATATTCAAACATACCAATCTACCGCCAAAGAGAATTTTCTGCAAGAAATAAAAAATGCAAAATCAGAAGCAAGTATTTATAAGAATAGTTTGTTAGAAATGGGCAACGAATGTGAAATGTTATCAAAAATGTTAATGGAAATTAAAACTGATAATCAGATTCTAAAAGAAGAACTAAAAAAACATAGTCAAGAAAGTATAAAATTTGAAAACACCATCAGTAGACTTGAGGAAGACAAAATACTTTTAGAAAACTATGTAAGAAGTATAGAGAATGAAAGGGATACCTTGGAATTTGAGATGCGGAATCTTCAAAGAGAATATTTAAATCTAAGTGAAAAAATCTATAATCATCATATTGACCTATCAAAAATGGGTTACATTTCAAGAAGAGAGAAATTCCATCTTGACATCTATGATATATATGAAGACACCTCTAGTCCTAGGAGCAGGCCTTTAGCCCCTGATTTGAAAGGAATTCCAAGTAAACCATATCAATTGCTTCCATCCAAGCCATGTAAATAA

Related Sequences

bmy_00303T0 SequenceType object (3)

Length: 898 aa      View alignments
>bmy_00303T0
SEQPGPPPRRGPSAPSRGRSARPRPESPRLASFLPAKPKATYCSVTEKNPEEEEEVDCVLLSAPKILNSSEGVKENGGSEIEYGCITESENQIQPQSALKALQHQLESFQALRMQTLQNVSMVQSEISEILNKSITEVENPQFSSEKNLVFSTRNEKALGDWIVKNENKETPVLKTLKDVRLPLYFCNFLPIENQEETLSMEKIQHFEDPRTLHSVEEIFSSDSVNSLSQGINIPCQIHFKDILTSTDNSASENSDLKNYNNLYNFLPNVPQNGMSQADMVIVDKSRITVPFLKHGFCENLDDICHSIKQMKEELQKSHDRELALTNELQTLKAIPRNGNYDLPPTHKEKINFIKEENIESNLNEDTKSKRISELEALVNKLLPLRETVSKFHVNFCRKCKKLSKSEIHRGGKNEKNNKEIPITDKNIADLKLHSRVPRHTLAFFDPTKYAMKDKERQPFAVKQGSIIFENEKTSKVNSVTEQCVAKIQYLQNYLKESMQIQKKVMKLENENLTLKMKIKPLVFITQSLIQKIEMYEKQLKTLVEEKNTIQSKLIKTEEDGKECLKELKEIISNYNVLQGQNKTLEEKNSQLSLEKQQMIETLEQLKSKEHQTQSDMAIVNNENKLLITEMESMKTNILLIQEEKEMLEEKTYQLLKEKGSLENEQKENQLEIMQLKEKERLAKTEQETLLQIIETVKNEKLNLETTLQESTAAREMMEREIEDIQTYQSTAKENFLQEIKNAKSEASIYKNSLLEMGNECEMLSKMLMEIKTDNQILKEELKKHSQESIKFENTISRLEEDKILLENYVRSIENERDTLEFEMRNLQREYLNLSEKIYNHHIDLSKMGYISRREKFHLDIYDIYEDTSSPRSRPLAPDLKGIPSKPYQLLPSKPCK*