Sequence detailsbmy_00308 (Coding sequence)

Part of scaffold_3 (SequenceType object (1))

For more information consult the page for scaffold_3 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SNX25ENSTTRG00000004646 (Bottlenosed dolphin)

Gene Details

sorting nexin 25

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004386, Bottlenosed dolphin)

Protein Percentage 69.07%
cDNA percentage 70.21%
Ka/Ks Ratio 0.39786 (Ka = 0.0202, Ks = 0.0507)

SNX25ENSBTAG00000010351 (Cow)

Gene Details

sorting nexin-25

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000053444, Cow)

Protein Percentage 87.29%
cDNA percentage 88.77%
Ka/Ks Ratio 0.34042 (Ka = 0.0855, Ks = 0.2512)

SNX25 (Minke Whale)

Gene Details

sorting nexin 25

External Links

Gene match (Identifier: BACU007189, Minke Whale)

Protein Percentage 93.99%
cDNA percentage 95.36%
Ka/Ks Ratio 0.6456 (Ka = 0.0432, Ks = 0.0669)

Genome Location

Sequence SequenceType object (2)

Length: 2004 bp    Location:4643967..4611055   Strand:-
Raw sequence 
>bmy_00308
ATGAAGGCTGATCTCCTGAGGGCCAGGAACATGAAAAGGTACATTAACCAACTAACTGTGGCAAAGAAGCAGTGTGAGAAGAGGATCAGAATCCTGGGAGGCCCTGCCTACAACCAGCAAGAGGATGGGGCCTTGGATGAGGGGGAAGGGCCTCAAAGCCAGAAGATTCTTCATTTCAAAGATATCTTGGCCAGTACTTCCTACCGAGAGCACTTTCGAACGTACATGGAAAGGATGGACAAGAGAGCTCTGATGAGCTTTTGGGAGTCTGTGGAATATTTAAAGAATGCTAACAAGAACGAAATTCCACAATTAGTTGGTGAAATTTACCAGAATTTCTTTGTGGAGAGCAAAGAAATATCTGTGGAAAAATCACTTTACAAAGAAATCCAGCAGTGTCTTGTAGGAAATAAAGGAATTGAAGTGTTCTGCAAAATCCAGGGAGACGTTTATGAGACGCTGAAGGATAGGTATTACCCTTCATTTATTGTCAGTGACCTGTATGAGAAATTGATGATAAAAGAGGAAGAAAAACATGTCTCCCAGTTGATTTCCAACAAGGATGAAATGGACCCAGGAGGTGAGGCTGGTGAGGAATCTGTCGATGAAGGCACCAGTCGGATTAATGAACAAACCAGTTTTGCTGTAAACAAACTACGAGAACTAAATGAGAAACTTGACTATAAGAGGCAAGCTCTAAATTCTATTCAAAATGCACCAAAACCTGACAAGAAGAGAAAGAACGCACAGAACTTCAGCTGCACATGGCAAGAACAGATTGGTGGTGTGAGAACCTCGGTATGTGGAAAGCCTCCATCACCAGTGGAGAGCTTACAAGAAGTTGGAGGAGTTGAAACTAAGAACTGGACAGTCCCCAGAAGGCTCAGTGAGTTTCAGAATTTACACCGGAAACTTAGTGAGTGTTTCCCTTCTTTAAAAAAAGTCCAGTTGCCTTCTCTTAGCAAGCTGCCTTTCAAATCTGTAGATCAAAAGTTTATGGAAAAGTCAAAGAATCAATTAAATAAGTTTTTACAGGTAAGCAAACTTTCTGCATATGGGAGGAAAATTAGTTATTTGGGGGTTATTGGGGGAGGAAAGGGAAGTGGTTTTGGGTTCAGAATTGCGATGAAAGTAAATTTCCCGGGACAGTCAACTCTTTGCCTTCACTCCTGGTGGCTCCCAGCGCGCAGACGAACCGCGCAGGAGGAATTAATCCTCTTTCTCCCACAGAGTCTGCTTTCAGATGAAAGACTGTGTCAGAGTGAAGCACTTTATGCCTTTTTGAGCCCTTCTCCTGACTACCTCAAGGTTATTGACGTGCAGGGGAAAAAAGCCACTTTTTCATTGTCCTCATTTCTGGAAAGACTCCCTCGCGACTTCTTCTCCCATCAGGAGGAGGAGGCAGAGGAGGACAGTGACCTGTCAGATTATGGTGATGACATGGATGGAAGGAAAGACTCCTTGGCTGAACCATGTTTCATGCTGATTGGGGAGATTTTTGAACTTCGAGGAATGTTTAAATGGGTGAGAAGAACATTAATTGCTCTCGTTCAGGTCACTTTCGGAAGAACCATCAACAAACAAATCCGGGACGCAGTGGACTGGGCCGTCAGCGAGCAGATGGTGGTCTGCTACATCGGCGCTCTCCGCGATGCTCTGTGGCCCGCTGGGAATTTGGCGCCTCCGAACACAATCCCAAGTGAAGAACAAAGCCAGGAAACAAAGCGGAGAGCACAGCAGAAGCTGCTTGAAAACATTCCAGATATGCTTCAGAGCCTTGTTGGACAGCAAAATGCCCGTCATGGTATAATAAAAATATTCAACGCACTGCAAGAAACGAGAGCCAATAAGCATCTGTTATATGTGCTGATGGAACTGCTGCTAATTGAATTGTGTCCTGAGCTGAGAACTCATTTAGATGAACTTAAAGCTTGTCAGAATTATGAACATTGTACAGTTAATTTCCTCCCTGAGGATTCTGAACATTCCTATATTCGTGTGTAT

Related Sequences

bmy_00308T0 SequenceType object (3)

Length: 668 aa      View alignments
>bmy_00308T0
MKADLLRARNMKRYINQLTVAKKQCEKRIRILGGPAYNQQEDGALDEGEGPQSQKILHFKDILASTSYREHFRTYMERMDKRALMSFWESVEYLKNANKNEIPQLVGEIYQNFFVESKEISVEKSLYKEIQQCLVGNKGIEVFCKIQGDVYETLKDRYYPSFIVSDLYEKLMIKEEEKHVSQLISNKDEMDPGGEAGEESVDEGTSRINEQTSFAVNKLRELNEKLDYKRQALNSIQNAPKPDKKRKNAQNFSCTWQEQIGGVRTSVCGKPPSPVESLQEVGGVETKNWTVPRRLSEFQNLHRKLSECFPSLKKVQLPSLSKLPFKSVDQKFMEKSKNQLNKFLQVSKLSAYGRKISYLGVIGGGKGSGFGFRIAMKVNFPGQSTLCLHSWWLPARRRTAQEELILFLPQSLLSDERLCQSEALYAFLSPSPDYLKVIDVQGKKATFSLSSFLERLPRDFFSHQEEEAEEDSDLSDYGDDMDGRKDSLAEPCFMLIGEIFELRGMFKWVRRTLIALVQVTFGRTINKQIRDAVDWAVSEQMVVCYIGALRDALWPAGNLAPPNTIPSEEQSQETKRRAQQKLLENIPDMLQSLVGQQNARHGIIKIFNALQETRANKHLLYVLMELLLIELCPELRTHLDELKACQNYEHCTVNFLPEDSEHSYIRVY