Sequence detailsbmy_00317 (Coding sequence)

Part of scaffold_3 (SequenceType object (1))

For more information consult the page for scaffold_3 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCDC111ENSTTRG00000006506 (Bottlenosed dolphin)

Gene Details

coiled-coil domain containing 111

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000006158, Bottlenosed dolphin)

Protein Percentage 93.67%
cDNA percentage 97.38%
Ka/Ks Ratio 1.87025 (Ka = 0.0315, Ks = 0.0169)

CCDC111ENSBTAG00000018863 (Cow)

Gene Details

Coiled-coil domain-containing protein 111

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000025112, Cow)

Protein Percentage 87.0%
cDNA percentage 90.82%
Ka/Ks Ratio 0.31519 (Ka = 0.068, Ks = 0.2158)

Additional orthologs identified in other species via the OPTIC pipeline.

PRIMPOL (Human)   Ccdc111 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1575 bp    Location:5182278..5149697   Strand:-
Raw sequence 
>bmy_00317
ATGAAGAGAAAATGGGAAGCAAAACTGAAGCAAATTGAAGAACGAGCATCCCGTTATGAGAGGGAACCATTGTCCTTGGTGTACAGGCCAAGATTGTCTAAGCCAGAAGAACCACCATCCATTTGGAAACTATTTCATCGGCAAACTCAAGCTTTTAATTTTGTTAAAAGCTGTAAAGAGGACGTTCATGTATTTGCTTTGGAATGCAAGGTGGGCGATGGACAACGTATTTACCTCGTAACAACGTATGCTCAACTTTGGTTTTACTATAAATCCCGAAGAGCTCTCTTACACTGCTATGAAGTCATTCCTGAAAATGCTGTGTGCAAGCTTTATTTTGATTTGGAATTTAACAGACTTGCCAATCCAGGAGCTGATGGGAAAAAGATGGTTGCATTACTCATTGAGCATGTTTGTAAAGCACTTCAACAGTTTTACAGGGTTAGTTGTTCAGCTGAAGATGTTCTCAACTTGGATTCTAGCACCAGTGAAAAATTTAGCCGCCATTTAATATTTCAACTCCATGATGTGGCATTTAAAGATAATATTCATGTTGGTAATTTTGTGAGAAAAATTTTAGAGCCTGCTTTTCACTTAATTGCTAGTGAAGATGATGATATGACTCCAAAGACAATGGGCCATGAATTTTCCCATTTTTCTGAAACACCAATTAAACAAGGAATTTCCTTTAGCAAAAAGTCCACAGATGAGGATATAGGAGAGAGCTGGACAACGAATTCAAAGAAACTGGAGAGGCTGGGGTCAGCTAAGCAAAGCGGTCCTGATCTTTCATTTTTAATTGTGAAGAATAACATAGGAGAAAAGCATCTTTTTGTAGATCTAGGAGTTTATACAAGAAATAGAAACTTTCGACTGTATAAATCATCAAAAATAGGAAAGTGTGTGCCTTTGGAGGTTGCTGAAGATAACAGATTTTATCCTATACAATCGAAGAATATTTCCAAAGAAAATCAATATTTCCTCTCTGCTTTGGTCAGCAATGTCAGATTCTCAGATACTTTACGAATTCTGACATGTGACATATCTCAAAATAAACAAAAACGAGTTGAGTATTTTAACCATACCAGTACTTCAGTAGAAACTATTGAAGGTTTTCAGTGTTCACCTTACCCTGAAATTGATCAATTTGTTCTCTTGTTGGTGAATAAAAATGGCATTAAAGGAGGAATTCGGCGTTGGAACTACTTTTTCCCAGAAGAATTATTGGTTTATGATATTTGTAAATACCGCTGGTGTGAAAACATTGGAAGAGCCCACAAGAGTTTCCCATTACCTGCTGAAGTATGTCTCCTGTTTCTTCTCAAAGAGGAAGAGGAGTTTACAGCAGATAAAACAAGGAACAATGAAACCAAGAATCCTCATGAACCATCATCTAGTGCATCGTCAAAAGGTACATTTTCTGATGCTGACTGGGATAATGGCATTGATGATGCTTATATTTTGGAGGCTACAGAAGATGCTGAATTGGCAGAAGCTGCAGAGAACAGTCTTCTCGGTTATAATGGAATTGATGAAATTCCTGATGAACTAATTATAGAAGTATTACAAGAGTAG

Related Sequences

bmy_00317T0 SequenceType object (3)

Length: 525 aa      View alignments
>bmy_00317T0
MKRKWEAKLKQIEERASRYEREPLSLVYRPRLSKPEEPPSIWKLFHRQTQAFNFVKSCKEDVHVFALECKVGDGQRIYLVTTYAQLWFYYKSRRALLHCYEVIPENAVCKLYFDLEFNRLANPGADGKKMVALLIEHVCKALQQFYRVSCSAEDVLNLDSSTSEKFSRHLIFQLHDVAFKDNIHVGNFVRKILEPAFHLIASEDDDMTPKTMGHEFSHFSETPIKQGISFSKKSTDEDIGESWTTNSKKLERLGSAKQSGPDLSFLIVKNNIGEKHLFVDLGVYTRNRNFRLYKSSKIGKCVPLEVAEDNRFYPIQSKNISKENQYFLSALVSNVRFSDTLRILTCDISQNKQKRVEYFNHTSTSVETIEGFQCSPYPEIDQFVLLLVNKNGIKGGIRRWNYFFPEELLVYDICKYRWCENIGRAHKSFPLPAEVCLLFLLKEEEEFTADKTRNNETKNPHEPSSSASSKGTFSDADWDNGIDDAYILEATEDAELAEAAENSLLGYNGIDEIPDELIIEVLQE*