Part of scaffold_4 (Scaffold)

For more information consult the page for scaffold_4 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SOCS5 ENSTTRG00000005557 (Bottlenosed dolphin)

Gene Details

suppressor of cytokine signaling 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005243, Bottlenosed dolphin)

Protein Percentage 99.25%
cDNA percentage 99.0%
Ka/Ks Ratio 0.07677 (Ka = 0.0025, Ks = 0.0322)

BT.58314 ENSBTAG00000008987 (Cow)

Gene Details

suppressor of cytokine signaling 5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011826, Cow)

Protein Percentage 97.57%
cDNA percentage 95.83%
Ka/Ks Ratio 0.07529 (Ka = 0.0104, Ks = 0.138)

SOCS5  (Minke Whale)

Gene Details

suppressor of cytokine signaling 5

External Links

Gene match (Identifier: BACU013894, Minke Whale)

Protein Percentage 99.44%
cDNA percentage 99.5%
Ka/Ks Ratio 0.16619 (Ka = 0.0018, Ks = 0.0107)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1611 bp    Location:197099..194812   Strand:-
>bmy_00324
ATGGATAAAGTGGGGAAAATGTGGAATAACTTCAAATACAGGTGTCAGAATCTCTTCAGTCATGAGGGAGGAAGCCGTAGTGAAAATGTGGATATGAACTCCAACAGATGTTTGTCTGTCAGAGACAAAAACAYCTGTATAGGAGACTCAGCTCCTCAGCAACAAAGCAGTCCCTTAAGAGAAAATGTTGCCTTACAACTGGGGTTAAGCCCTTCAAAGAATTCTTCGAGGAGAAACCAAAACTGTGCCACTGAAATTCCTCAGATTGTTGAAATAAGCATTGAAAAGGATAATGACTCATGTGTCACCCCAGGAACAAGACTTGCAAGAAGAGATTCCTACTCTCGACATGCTCCTTGGGGTGGGAAGAAGAAACATTCCTGTTCTACAAAGACACAGAGTTCACTGGATACTGATAAAAAGTTTGGTAGAACTCGAAGTGGACTTCAAAGGAGAGAGAGGCGATACGGTGTAAGCTCTGTGCACGACATGGACAGCGTTTCCAGCAGAGCCGTAGGAAGTCGCTCTCTGAGACAGAGGTTGCAGGATACTGTGGGCTTGTGTTTTCCCATGAGAACTTACAACAAGCAGTCAAAGCCCCTCTTTTCTAATAAAAGAAAAATTCACCTTTCTGAATTAATGCTTGAGAAATGCCCTTTTCCTGCTGGCTCGGATTTGGCCCAAAAATGGCATTTGATTAAACAGCATACAGCCCCTGTGAGCCCACATTCAACATTTTTTGATACATTTGATCCATCCTTGGTTTCTACAGAAGATGAAGAAGATAGGCTTCGAGAGAGAAGGCGGCTTAGTATTGAAGAAGGGGTTGACCCCCCTCCCAACGCACAAATACATACGTTTGAAGCCACTGCACAGGTTAACCCGTTATATAAACTGGGACCAAAGTTAGCTCCTGGAATGACTGAAATAAATGGGGACAATTCTGCAATTCCACAAGCTAACTGTGACTCTGAAGAGGACACAACCACGCTATGTTTGCAGTCACGGAGGCAGAAGCAACGTCAGGTATCTGGAGACAGCCATGCCCACGTTAGCAGACAGGGAGCTTGGAAAGTCCATACACAGATTGATTACATACACTGCCTCGTGCCGGATTTGCTTCAGATCACAGGTAATCCCTGTTACTGGGGAGTGATGGACCGTTACGAAGCAGAAGCCCTTCTGGAAGGGAAACCTGAAGGTACATTTTTGCTCAGGGACTCTGCGCAGGAGGACTACCTCTTCTCTGTGAGCTTCCGTCGCTACAACAGATCCCTGCATGCCCGAATTGAACAGTGGAATCACAACTTTAGTTTTGATGCTCACGACCCGTGTGTGTTTCACTCCTCCACTGTAACAGGACTTTTGGAACATTACAAAGACCCCAGTTCTTGCATGTTTTTTGAACCATTGCTTACGATATCACTAAATAGGACTTTCCCTTTTAGCCTGCAGTACATCTGCCGTGCAGTCATCTGCAGATGCACTACGTATGATGGAATTGATGGGCTCCCTTTACCGTCAATGTTACAGGATTTTTTAAAAGAGTATCATTATAAACAAAAAGTTAGAGTTCGCTGGCTAGAACGAGAACCAGTCAAGGCAAAGTAA

Related Sequences

bmy_00324T0 Protein

Length: 537 aa      View alignments
>bmy_00324T0
MDKVGKMWNNFKYRCQNLFSHEGGSRSENVDMNSNRCLSVRDKNXCIGDSAPQQQSSPLRENVALQLGLSPSKNSSRRNQNCATEIPQIVEISIEKDNDSCVTPGTRLARRDSYSRHAPWGGKKKHSCSTKTQSSLDTDKKFGRTRSGLQRRERRYGVSSVHDMDSVSSRAVGSRSLRQRLQDTVGLCFPMRTYNKQSKPLFSNKRKIHLSELMLEKCPFPAGSDLAQKWHLIKQHTAPVSPHSTFFDTFDPSLVSTEDEEDRLRERRRLSIEEGVDPPPNAQIHTFEATAQVNPLYKLGPKLAPGMTEINGDNSAIPQANCDSEEDTTTLCLQSRRQKQRQVSGDSHAHVSRQGAWKVHTQIDYIHCLVPDLLQITGNPCYWGVMDRYEAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYNRSLHARIEQWNHNFSFDAHDPCVFHSSTVTGLLEHYKDPSSCMFFEPLLTISLNRTFPFSLQYICRAVICRCTTYDGIDGLPLPSMLQDFLKEYHYKQKVRVRWLEREPVKAK*