Sequence details bmy_00326 (Coding sequence)

Part of scaffold_4 (Scaffold)

For more information consult the page for scaffold_4 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PIGF ENSTTRG00000011894 (Bottlenosed dolphin)

Gene Details

phosphatidylinositol glycan anchor biosynthesis, class F

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011282, Bottlenosed dolphin)

Protein Percentage 97.32%
cDNA percentage 97.54%
Ka/Ks Ratio 0.25446 (Ka = 0.0127, Ks = 0.0499)

BT.31254 ENSBTAG00000015719 (Cow)

Gene Details

phosphatidylinositol-glycan biosynthesis class F protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020863, Cow)

Protein Percentage 91.28%
cDNA percentage 94.18%
Ka/Ks Ratio 0.64457 (Ka = 0.0504, Ks = 0.0782)

PIGF  (Minke Whale)

Gene Details

phosphatidylinositol glycan anchor biosynthesis, class F

External Links

Gene match (Identifier: BACU019872, Minke Whale)

Protein Percentage 97.32%
cDNA percentage 98.21%
Ka/Ks Ratio 0.54714 (Ka = 0.0129, Ks = 0.0236)

Additional orthologs identified in other species via the OPTIC pipeline.

PIGF (Human)   Pigf (Mouse)  

Genome Location

Sequence Coding sequence

Length: 450 bp    Location:334118..338147   Strand:+
Raw sequence 
>bmy_00326
ATGAAAGATAYTGACATCAAGAGACTACTGTATGTCCATCTATTATGCATATTTTCAATTATCCTAAGCATCTTCATTCCATCATTCTTCTTGGAGAACTTCTCAGTACTGGAAACACACTTGACATGGTTGTGCATCTGTTCTGTTTCTGTAACTGCCGTCAATTTAGTATTGTATTTAGTAGTGAAACCAAATGCATCTTCTAAAAGAAGTTCATTATCGTACAAGGTAACCAGATTTTTGAAATGCTGTATCTACTTTCTTATGTCTTGTTTCTCCTTTCATGTAATTTTTGTTCTATATGGAGCACCACTAATAGAGTTGGCGTTGGAAACATTTTTACTTGCAGTTACTTTGTCCACTTTTACTACTGTACCTTGTTTATGTTTGTTAGGACCAAACTTCAAAGCATGGCTAAGAGTTTTCAGTAGAAATGGAACCATCTTCTAG

Related Sequences

bmy_00326T0 Protein

Length: 150 aa      View alignments
>bmy_00326T0
MKDXDIKRLLYVHLLCIFSIILSIFIPSFFLENFSVLETHLTWLCICSVSVTAVNLVLYLVVKPNASSKRSSLSYKVTRFLKCCIYFLMSCFSFHVIFVLYGAPLIELALETFLLAVTLSTFTTVPCLCLLGPNFKAWLRVFSRNGTIF*