Part of scaffold_4 (Scaffold)

For more information consult the page for scaffold_4 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC3A1 ENSTTRG00000001257 (Bottlenosed dolphin)

Gene Details

solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001182, Bottlenosed dolphin)

Protein Percentage 84.02%
cDNA percentage 83.85%
Ka/Ks Ratio 0.16668 (Ka = 0.0086, Ks = 0.0518)

SLC3A1 ENSBTAG00000017421 (Cow)

Gene Details

neutral and basic amino acid transport protein rBAT

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023161, Cow)

Protein Percentage 89.69%
cDNA percentage 92.53%
Ka/Ks Ratio 0.34373 (Ka = 0.0541, Ks = 0.1574)

SLC3A1  (Minke Whale)

Gene Details

solute carrier family 3 (amino acid transporter heavy chain), member 1

External Links

Gene match (Identifier: BACU013907, Minke Whale)

Protein Percentage 98.97%
cDNA percentage 99.05%
Ka/Ks Ratio 0.21057 (Ka = 0.0048, Ks = 0.0228)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1167 bp    Location:2514440..2500512   Strand:-
>bmy_00338
GAAATTATACAGTTTTGGCTCTCAAAGGGTGTCGATGGCTTTAGCTTCGATGCTGTTCAATTCCTTCTAGAAGCAAAGCATCTGAGAGACGAGGCCCAAGTGAATAAGACCCAAATCCCGGACACAGTCACTCACTACTCGGAGCTGTACCATGACTTCACCACCACACAGGTGGGAATGCACGACATTGTCCGCAGCTTCCGGCAGACAATGGACCAATACAGCAGGGAGCCTGGGAGATACAGGTTCATGGGAACTGAAGCCCATGGAGAGAACATTGCCAAGACCATGATGTACTACGGTCTGCCTTTTATCCAAGAAGCAGATTTTCCCTTCAACAGTTACCTCGGTAACCTAGACATGCCTTCTGGGAACAGTGTGTTTGAGGTTATCACATCGTGGATGGAAAACATGCCAGAAGGAAAATGGCCTAATTGGATGACTGGTGGACCAGACAATGTCCGGCTGACTTCTCGTCTGGGGAAACAATATGTCAACATCATGAACATGCTTGTGTTCACACTGCCTGGAACTCCCATAACTTACTACGGGGAAGAAATAGGAATGAGAAATATTTTAGCCACAAATCTCAATGAAACCTATGATGTTGATACTCTTCTCTCAAAGTCACCAATGCAGTGGGACAATAGCTCAAATGCTGGTTTTTCTGAAGGCAATCATACCTGGTTACCCACCAGTTCAGATTACCACACTGTGAATGTTGATGTCCAAAAGACTCAGCCCAGATCAGCACTGAAGTTATATCAAGAATTAAGTTTGCTTCACGCCAATGAGCTGCTCCTCAGCAGGGGCTGGTTTTGCTACTTGAGGAATGACAACCACTCTGTTGTGTACACAAGAGAGCTGGATGGCACAGACAGAGTCTTCCTCATGGTTCTGAATTTTGGAGAATTATCACTGCTAAATCTAAAGGAAATGATTTCAAATATTCCCACAAGAGTAAGGATAAGGTTAAGTACCAATTCTGCCTACAAAGGCCGTGAAGTTGATACACATGCCATTACACTGGACAAAGGAGAAGGACTCATCCTTGAATACAACACGAGGAATCTCCTTCATCACCAAACAGCTTTCCAAGACAGATGTTTTGTTTCCAACCGGGCATGCTATTCCAGTGTACTGAACATACTGTACAGCTTGTGTTAG

Related Sequences

bmy_00338T0 Protein

Length: 389 aa      View alignments
>bmy_00338T0
EIIQFWLSKGVDGFSFDAVQFLLEAKHLRDEAQVNKTQIPDTVTHYSELYHDFTTTQVGMHDIVRSFRQTMDQYSREPGRYRFMGTEAHGENIAKTMMYYGLPFIQEADFPFNSYLGNLDMPSGNSVFEVITSWMENMPEGKWPNWMTGGPDNVRLTSRLGKQYVNIMNMLVFTLPGTPITYYGEEIGMRNILATNLNETYDVDTLLSKSPMQWDNSSNAGFSEGNHTWLPTSSDYHTVNVDVQKTQPRSALKLYQELSLLHANELLLSRGWFCYLRNDNHSVVYTRELDGTDRVFLMVLNFGELSLLNLKEMISNIPTRVRIRLSTNSAYKGREVDTHAITLDKGEGLILEYNTRNLLHHQTAFQDRCFVSNRACYSSVLNILYSLC*