Part of scaffold_4 (Scaffold)

For more information consult the page for scaffold_4 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DYNC2LI1 ENSTTRG00000006392 (Bottlenosed dolphin)

Gene Details

dynein, cytoplasmic 2, light intermediate chain 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006048, Bottlenosed dolphin)

Protein Percentage 96.4%
cDNA percentage 98.2%
Ka/Ks Ratio 0.65323 (Ka = 0.0163, Ks = 0.0249)

DYNC2LI1 ENSBTAG00000013676 (Cow)

Gene Details

Cytoplasmic dynein 2 light intermediate chain 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000043454, Cow)

Protein Percentage 92.0%
cDNA percentage 95.11%
Ka/Ks Ratio 0.35368 (Ka = 0.0362, Ks = 0.1025)

DYNC2LI1  (Minke Whale)

Gene Details

dynein, cytoplasmic 2, light intermediate chain 1

External Links

Gene match (Identifier: BACU013912, Minke Whale)

Protein Percentage 99.11%
cDNA percentage 99.41%
Ka/Ks Ratio 0.24161 (Ka = 0.0037, Ks = 0.0154)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 678 bp    Location:3007324..2984509   Strand:-
>bmy_00343
ATGGAAAATCTGTTGCACGCCACAAAACTTCATGTAGATAAAGTGATAATGAAACTGGGGAAGAAAAATGCTAAAGCAGTTTATGAAATGAGACAGAAGATATGGAGCAATATGCAGAAGGACCATCCAGATCGTGAATTAATTGACCCATTTCCAATTCCTCTGGTCATAATTGGAAGTAAATACGATATTTTTCAGGATTTTGACTCTGAGAAGAGGAAGGTAATATGCAAGACACTTCGATTTGTTGCACATTATTACGGAGCATCATTAATGTTTACCAGTAAATCAGAAGCTCTATTACTAAAAATACGTGGAGTTATTAACCAGTTGGCATTTGGCATTGACAAAAGCAAATCAACATGTGTGGATCAGAATAAACCACTGTTTGTCACAGCAGGATTGGATTCTTTAAGTCAAATAGGATCTCCTCCTGTTCCTGACAATGACATTGGAAAGCTTCATGCCCATTCACCAATGGAATTGTGGAAAAAGGTGTATGAAAAGCTCTTTCCACCAAAGAGTATCAACACACTAAAAGATGTCAAGGACCCTGCAAGAGACGCTCAATATGCTGAAAGCGAAGTTGATGAAATGAGAATTCAGAAGGATCAGGAACTGGAACAGTACAAAAGAAGTTCTTCCAAGTCTTGGAAACAAATGGAGCTTGATTCCTGA

Related Sequences

bmy_00343T0 Protein

Length: 226 aa      View alignments
>bmy_00343T0
MENLLHATKLHVDKVIMKLGKKNAKAVYEMRQKIWSNMQKDHPDRELIDPFPIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSEALLLKIRGVINQLAFGIDKSKSTCVDQNKPLFVTAGLDSLSQIGSPPVPDNDIGKLHAHSPMELWKKVYEKLFPPKSINTLKDVKDPARDAQYAESEVDEMRIQKDQELEQYKRSSSKSWKQMELDS*