Part of scaffold_5 (Scaffold)

For more information consult the page for scaffold_5 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LIMK1 ENSTTRG00000008676 (Bottlenosed dolphin)

Gene Details

LIM domain kinase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008226, Bottlenosed dolphin)

Protein Percentage 98.56%
cDNA percentage 98.32%
Ka/Ks Ratio 0.07959 (Ka = 0.0059, Ks = 0.0745)

LIMK1 ENSBTAG00000044083 (Cow)

Gene Details

LIM domain kinase 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053752, Cow)

Protein Percentage 97.11%
cDNA percentage 94.38%
Ka/Ks Ratio 0.03297 (Ka = 0.0119, Ks = 0.3614)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1872 bp    Location:564103..586632   Strand:+
>bmy_00380
GCAGGAAGCGAGTTGCCCGTGTGTGCAAGCTGCGGCCAGAGGATCTATGATGGCCAGTACCTCCAGGCCCTGAATGCTGACTGGCACTCGGACTGCTTCAGTGCCTCCCTTTCACACCAGTACTATGAGAAGGATGGGCAGCTCTACTGCAAGAAGGACTACTGGGCCCGCTATGGCGAGTCTTGCCACGGGTGCTCAGAGCACATCACCAAGGGGCTGGTCATGGTGGCCGGGGAGCTGAAATACCACCCCGAATGCTTCATCTGTCTCACATGTGGGACCTTCATCGGTGACGGAGACACCTACACTCTGGTGGAGCACTCCAAGCTCGGACACTGCTACTACCAGACTGTGGTGACCCCCGTCATTGAGCAGATCCTGCCTGATTCCCCCAGCTCCCACCTGCCCCACACAGTCACCCTCGTATCCATCCCAGCCTCAGCTCATGGCAAACGTGGCCTCTCGGTCTCCATCGACCCCCCTCACGGCCCGCCAGGCTGCAGCACAGAGCACTCCCACACCGTCCGCGTCCAGGGAGTGGACCCGGGCTGCATGAGCCCGGATGTGAAGAATTCTATCCACGTTGGAGACCGGATCCTGGAAATCAATGGCACGCCCATCCGGAATGTGCCCTTGGACGAGATTGATCTGCTGATCCAGGAAACCAGCCGCCTGCTCCAGCTGACTCTTGAGCATGACCCCCATGACACACTGAGCCACGGGCTGGGGCCTGAGTCCAGCCCCCTGGTCTCCCCGGTTCACACTCCCAGCGGGGAGGCGGGCAGCTCCGGCCGGCAGAAGCCTGTCCTGAGGAGCTGCAGCATCGACAGGTCCCCGGGCGCCGGCTCGCTGGGCTCCCCGGCCTCCCAGCACAAGGACCTGGGTCGCTCCGAGTCCCTCCGTGTGGTCTGCCGGCCGCACCGCATCTTCCGGCCTTCGGACCTCATCCACGGGGAGGTGTTGGGCAAGGGCTGCTTCGGCCAGGCCATCAAGGTGACACACCGGGAGACAGGCGAGGTGATGGTGATGAAGGAGCTGATCCGCTTCGATGAGGAGACCCAGCGGACGTTCCTCAAGGAGGTGAAGGTCATGCGATGCCTGGAGCACCCCAACGTGCTCAAGTTCATCGGGGTGCTCTACAAGGACAAGAGGCTCAATTTCATCACCGAGTACATCAAGGGTGGCACGCTCCGGGGCCTCATCAAGGGCATGGACAGCCAGTACCCGTGGAGTCAGAGGGTGAGCTTTGCCAAGGACATCGCTTCGGGGATGGCCTACCTCCACTCCATGAACATCATCCACCGGGACCTGAACTCCCACAACTGCTTGGTTCGTGAGAACAAGAACGTGGTGGTGGCCGACTTCGGGCTGGCGCGGCTCATGGTGGACGAGAAGACGCAGCCCGAGGGCCTGCGGAGCCTCAAGAAGCCAGACCGGAAGAAGCGTTACACGGTGGTGGGCAACCCCTACTGGATGGCGCCCGAGATGATCCACGGCCGCAGCTACGATGAGAAGGTGGATGTGTTTTCCTTTGGAATCGTCCTGTGTGAGATCATCGGGCGGGTGAAAGCTGACCCAGACTACCTGCCGCGCACCATGGATTTTGGCCTCAATGTGCGAGGCTTCCTGGACCGCTACTGCCCCCCAAACTGCCCCCCAAGCTTCTTCCCCATTACTGTGCGCTGCTGCGATCTGGACCCCGAGAAGAGGCCCTCTTTCGTGAAGCTGGAGCAGTGGCTGGAGACCCTCCACATGCACTTGGCCGGCCACCTGCCACTGGGCCCACAGCTGGAGCAGCTAGACAGGGGCTTCTGGGAGACCTACCGGCGCGGCGAGAGTGGACTGCCTGCCCACCCCGAGGTCCCCGACTGA

Related Sequences

bmy_00380T0 Protein

Length: 624 aa      View alignments
>bmy_00380T0
AGSELPVCASCGQRIYDGQYLQALNADWHSDCFSASLSHQYYEKDGQLYCKKDYWARYGESCHGCSEHITKGLVMVAGELKYHPECFICLTCGTFIGDGDTYTLVEHSKLGHCYYQTVVTPVIEQILPDSPSSHLPHTVTLVSIPASAHGKRGLSVSIDPPHGPPGCSTEHSHTVRVQGVDPGCMSPDVKNSIHVGDRILEINGTPIRNVPLDEIDLLIQETSRLLQLTLEHDPHDTLSHGLGPESSPLVSPVHTPSGEAGSSGRQKPVLRSCSIDRSPGAGSLGSPASQHKDLGRSESLRVVCRPHRIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGLIKGMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMIHGRSYDEKVDVFSFGIVLCEIIGRVKADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEQWLETLHMHLAGHLPLGPQLEQLDRGFWETYRRGESGLPAHPEVPD*