Sequence detailsbmy_00383 (Coding sequence)

Part of scaffold_5 (SequenceType object (1))

For more information consult the page for scaffold_5 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RFC2ENSTTRG00000008760 (Bottlenosed dolphin)

Gene Details

replication factor C (activator 1) 2, 40kDa

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008303, Bottlenosed dolphin)

Protein Percentage 78.48%
cDNA percentage 79.54%
Ka/Ks Ratio 0.38617 (Ka = 0.0918, Ks = 0.2378)

RFC2ENSBTAG00000018589 (Cow)

Gene Details

Replication factor C subunit 2

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000024740, Cow)

Protein Percentage 88.0%
cDNA percentage 87.33%
Ka/Ks Ratio 0.23321 (Ka = 0.0875, Ks = 0.3753)

RFC2 (Minke Whale)

Gene Details

replication factor C (activator 1) 2, 40kDa

External Links

Gene match (Identifier: BACU012011, Minke Whale)

Protein Percentage 91.14%
cDNA percentage 92.1%
Ka/Ks Ratio 0.4576 (Ka = 0.0681, Ks = 0.1489)

Additional orthologs identified in other species via the OPTIC pipeline.

RFC2 (Human)   Rfc2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1131 bp    Location:692390..670333   Strand:-
Raw sequence 
>bmy_00383
ATGGAGGCGCAGGAGAGCGGCGGTGGCAGTGGCGAGTGCGGGGCCCAGGACCTTGACCCGGCCCCCAGCAAGGCCCCCGGCAGCGCCGGCCAGTACGAGCTGCCGTGGTCTTTGCAAGAGAAGGGAATGTGCCCAATATCATCATTGCTAGCTTCCTCCTCAAGGAAGCCCATGATCACCAGAGCCCATACCATTCCCACCTCCCACTGGTCAGGCCTGCGGGTTGGTTGCTGTATTGATCTGGGCCCYCCAGGAACCGGCAAAACTACCAGCATCCTGTGTTTGGCACGAGCCCTGCTGGGTCCGGCCTTCAAGGATGCCGTTTTGGAGCTCAATGCCTCAAATGACAGGTAYACCTGGGAGGGCATTGACGTTGTGAGGAACAAAATCAAAATGTTTGCCCAACAGAAAGTCACCCTTCCCAAAGGGCGACACAAGATCATCATCCTGGATGAAGCAGACAGCATGACTGATGGAGCCCAGCAAGCCTTGAGGAGAACCATGGAAATCTACTCCAAAACGACCCGCTTCGCTCTTGCTTGTAATGCTTCGGATAAAATCATAGAGCCCATTCAGTCCCGGTGCGCAGTCCTCCGCTACACCAAGCTGACCGACGCTCAGATTCTTGCCAGGCTGCTGAACGTCATCGAGAAGGAGAAGGTGCAGTCCACGGACGATGGCCTGGAAGCCATCCTCTTCACCGCCCAGGGTGACATGAGGCAGGCATTGAACAACTTGCAGTCTACTTTCTCGGGATTCGGCTTCATCAACAGTGAGAATGTGTTCAAGGTCGACACCGAAGTCTATTTGGTGACGACTCTGGTGGTCTGTGACGAGCCCCACCCCTTGCTGGTGAAGGAGATGATCCAGCACTGTGTGAGCGCCAGTATCGATGAGGCCTACAAGATCCTCGCTCACCTGTGGCATCTTGGCTATTCCCCAGAAGACATCATTGGCAACATTTTTCGAGTGTGCAAAACCTTCCAAATGGCAGAATACTTGAAACTGGAGTTTATTAAGGAAATTGGATACACTCATATGAAAATAGCGGAAGGTGTGAACTCCCTTCTGCAGATGGCAGGGCTCCTGGCCAGGCTGTGTCAGAAGACAATGGCCCCGGTGGCCAGTTAG

Related Sequences

bmy_00383T0 SequenceType object (3)

Length: 377 aa      View alignments
>bmy_00383T0
MEAQESGGGSGECGAQDLDPAPSKAPGSAGQYELPWSLQEKGMCPISSLLASSSRKPMITRAHTIPTSHWSGLRVGCCIDLGPPGTGKTTSILCLARALLGPAFKDAVLELNASNDRYTWEGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILARLLNVIEKEKVQSTDDGLEAILFTAQGDMRQALNNLQSTFSGFGFINSENVFKVDTEVYLVTTLVVCDEPHPLLVKEMIQHCVSASIDEAYKILAHLWHLGYSPEDIIGNIFRVCKTFQMAEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTMAPVAS*