Part of scaffold_5 (Scaffold)

For more information consult the page for scaffold_5 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLIP2 ENSTTRG00000008782 (Bottlenosed dolphin)

Gene Details

CAP-GLY domain containing linker protein 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008321, Bottlenosed dolphin)

Protein Percentage 96.7%
cDNA percentage 97.46%
Ka/Ks Ratio 0.13801 (Ka = 0.0146, Ks = 0.1058)

CLIP2 ENSBTAG00000011875 (Cow)

Gene Details

CAP-Gly domain-containing linker protein 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015759, Cow)

Protein Percentage 95.46%
cDNA percentage 93.47%
Ka/Ks Ratio 0.03849 (Ka = 0.0191, Ks = 0.4962)

CLIP2  (Minke Whale)

Gene Details

CAP-GLY domain containing linker protein 2

External Links

Gene match (Identifier: BACU012009, Minke Whale)

Protein Percentage 96.46%
cDNA percentage 96.91%
Ka/Ks Ratio 0.22004 (Ka = 0.0221, Ks = 0.1006)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3705 bp    Location:750076..794026   Strand:+
>bmy_00384
TCCCCCCTGCACAAGCAGGCCTCGGGCTCCCCGGCCGCGGCCCCCGCCGCCCCCGAGAAGCCCGGCGCCAAGGCGGCCGAGGTGGGCGACGAGTTCGTGGGGGACTTCGTGGTGGGCGAGCGCGTGTGGGTGAATGGCGTGAAGCCAGGCGTGGTGCAGTACCTGGGCGAGACGCAGTTCGCGCCGGGCCAGTGGGCGGGCGTGGTGCTGGACGAGCCGGTGGGCAAGAACGACGGCGCCGTGGGCGGCGTGCGCTACTTCGAGTGCCCGGCCCTGCAGGGCATCTTCACGCGGCCCTCCAAGCTGACCCGGCAGCCTGCGGCCGAGGGTTCGGGCAGCGACGCGCACTCAGTCGAGTCGCTGACCACCCAGAACCTGTCGCTACACTCGGGCACGGCCACGCCGCCGCTGACCAGCCGCGTCATCCCCCTGCGGGAGAGCGTCCTCAACAGCTCCGTCAAGACCGGCAACGAGTCGGGCTCCAACCTCTCCGACAGCGGCTCTGTGAAGCGGGGTGACAAGGACCTGCGCCTGGGAGACCGTGTGCTGGTTGGTGGGACGAAGACTGGCGTGGTACGGTACGTCGGGGAGACAGACTTTGCCAAGGGCGAGTGGTGTGGCGTGGAGCTGGACGAGCCCCTTGGGAAGAACGATGGGGCAGTGGCGGGCACCAGGTACTTCCAGTGCCCGCCCAAGTTTGGCCTCTTCGCGCCCATCCACAAGGTAATCCGCATCGGCTTCCCATCCACCAGCCCAGCCAAGGCCAAGAAGACCAAGCGCATGGCCATGGGAGTCTCGGCACTGACCCACAGTCCCAGCAGTTCCTCCATCAGCTCCGTCAGCTCTGTGGCCTCCTCCGTGGGGGGCCGGCCCAGCCGCAGTGGCCTGCTCACGGAGACCTCTTCGCGCTATGCCCGCAAGATCTCGGGCACGACTGCCTTGCAAGAGGCGCTGAAGGAGAAACAGCAGCACATAGAGCAGTTGCTGGCCGAACGGGACCTGGAGCGGGCCGAGGTGGCCAAGGCCACGAGCCACATCTGTGAGGTGGAGAAGGAGATCGCCCTGCTCAAGGCACAGCATGAGCAGTATGTTGCAGAGGCAGAGGAGAAGCTGCAGCGGGCCCGGCTGCTGGTGGAGAGCGTGCGGAAAGAGAAGGTGGACCTGTCCAACCAGCTGGAGGAGGAGAGGAGGAAGGTGGAGGACCTGCAGTTCCGAGTGGAGGAGGAGTCCATCACCAAGGGAGACCTGGAGCTGACCACGGTGGCCGAGAAGTCGCGGGTGCTGCAGCTGGAGGAGGAGCTGAGCCTGCGGCGCGGGGAGATCGAGGAGCTGCAGCAGTGCCTGCTACACTGCGGCCCGCCGCCCGCCGACCACCCCGAGGCCGCCGAGACCCTGCGGCTGCGGGAGCGGCTGCTGTCCGCCAGCAAGGAGCACCAGAGGGAGAGCGGCATGTTGAGGGACAAGTACGAGAAGGCGCTGAGGGCCTACCAGGCGGAGGTGGAGAAGCTGCGGGCGGCCAACGAGAAGTACGCGCAGGAGGTGGCGGACCTCAAGGCCAAGGTCCAGCAGGCCACCAGCGAGAACATGGGGCTCATGGACAACTGGAAGTCCAAGCTGGACTCGCTGGCCCTGGACCACCAGAAGTCCCTGGAGGACCTCAAGGCCACCCTGAACTCGAGCCCGGGTGCCCAGCAGAAGGAGATCGGGGAGCTGAAGGCCGTGATGGAGGGCATCAAGATGGAGCACCAGCTGGAGCTGGGCAACTTGCGGGCCAAGCACGACCTTGAGACGGCCATGCACGTGAAGGAGAAAGAGGGCCTGCGGCAGAAGCTGCAAGAGGCCCAGGAGGAGCTGGCCGGGCTGCAGCAACACTGGCGGGCCCAGCTGGAGGCGCAGGCCGGCCAGCACCGGCTGGAGCTGCAGGAGGCCCGGGACCAGGGCCGCGGCGCCGAGCTGCGGGTGCGCGAGCTGGAGAAGCTGGACGTGGAGTACCGGGCCCAGGCGCAGGCCATTGCGTTCCTCAAGGAGCAGATCTCCCTGGCCGAGCAGAAGATGCTAGACTACGAGCTGCTGCAGCGCTCGGAGGCCCAGAGCAAGCAGGAGGCCGAGCGGCTGCGGGAGAAGCTTCTGGCCACTGAAAACAGACTCCAGGCTGTCGAGTCCCTGTGTTCGGCCCAGCACACCAACATGATTGAGTCCAACGACATTTCAGGGGAGAAGACGAGGATGAAGGAGACTATGGAGGGCCTGCAGGACAAGCTGAACAAGAGGGACAAAGAGGTGACAGCCTTAACATCCCAGACCGAGATGCTCAGGGCCCAAGTAAGTGCACTGGAGAGCAAGTGCAGGTCGGGAGAGAAGAAGGTGGACGCCCTCCAGAAGGAGAAGCGGCGCTTGGAGGTGGAGCTGGAGGCCATGTCCCGGAAGACCCATGACGCCTCGGGCCAGCTGGTCCTCATCAGCCAGGAGCTGCTCAGGAAGGAGCGGAGCCTGAACGAACTGCGCGTGTTGCTTCTGGAGGCCAATCGCCACTCCCCGGGGCCTGAGAGGGACCTGAGCCGCGAGGTCCACAAGGCCGAGTGGCGGATCAAGGAGCAGAAACTCAAGGATGACATCCGGGGCCTGCGGGAACAGCTGACCGGGCTGGACAAAGAGAAGTCCCTGTCGGATCAGAGGCGCTACTCCCTCATTGAGCCGTCCTCGTCCTCGTCACCGGAGCTCCTGCGGCTGCAGCACCAGCTGATGAGCACAGAGGATGCCCTGCGGGACGCGCTGGACCAGGCTCAGCAGGTGGAGAGGCTCATGGAGGCTATGAGGAGCTGCCCCGATAAGTCCCAGGCCACCGGCAATTCCGGTTCTGCAAATGGCATCCACCAGCAAGACAAGGCCCAAAAACAAGAGAGACAGGAGAACCCTGGCCACAGCATCTGCCGAGGGCCTGGCCCTGTGGGTGAGAAGCAGAGAGAGAGGACAAGCACTGACCCTGAGGGACACTGTGGAGCTGCCCGGTCCACACCAGAGCCCCTCCAGCCTGCCCCAGCAGCGCCACCTCCAGGCAGGGGCCAGGACTGTCGCTTTGGAGAAGAGAACAGTGTAACAATAACGTACCCACCGCCGCGGACAATCCCCCACCCCGACCCCCCTGCCGGACCAGGAGGCTTCCTCAAGCACGACCTTCCACAGAAGGCGGTACAGCCCCGGCCTGGCCCCCAGGACCTTCAGCCTGGACGCCCTGGACACCCTGGACACCCTGGACACCCCGGCAGTTTCTGGAGTTGGTTTGGGGAGGCCGAGGTGATCCGGCCAGGCCCCTTCCCCAGAAGGAGCTGCCCTGAGGACCCTCTTGGCCCTCTGGGCACGTCCCTGCCCTCCCTTTCTTCCCCTTCTTCTCCTGGGTCCCTCTCGGAGCCCAGAGCCATTGTCCCGGGAAGGGRCYAGAGGAGGGCTCCAGCTTCTCCTTCAGGCACCAAGGAGGGAAGTCCAGCCCTTAGGAGCCAGGTGGGGGACCCCCTTTTCTGCTTCCAGGCCAAGGCAGTCCCCCGGGCTTCTTGTCCCCGCACTGAGCCTCTTTCATGCAGTGGTACAAGTTCCCTTCAGCCTGTCTGCCCAGTGAGGCCCCACGTTCAAAGTGCTGGGAGGCGAGGCCCTTCGTTCCCACCCGGACCCCAACACACACACAGCTCCGAGCTGCTGGCCGGAGGGTAG

Related Sequences

bmy_00384T0 Protein

Length: 1235 aa      View alignments
>bmy_00384T0
SPLHKQASGSPAAAPAAPEKPGAKAAEVGDEFVGDFVVGERVWVNGVKPGVVQYLGETQFAPGQWAGVVLDEPVGKNDGAVGGVRYFECPALQGIFTRPSKLTRQPAAEGSGSDAHSVESLTTQNLSLHSGTATPPLTSRVIPLRESVLNSSVKTGNESGSNLSDSGSVKRGDKDLRLGDRVLVGGTKTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPPKFGLFAPIHKVIRIGFPSTSPAKAKKTKRMAMGVSALTHSPSSSSISSVSSVASSVGGRPSRSGLLTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHICEVEKEIALLKAQHEQYVAEAEEKLQRARLLVESVRKEKVDLSNQLEEERRKVEDLQFRVEEESITKGDLELTTVAEKSRVLQLEEELSLRRGEIEELQQCLLHCGPPPADHPEAAETLRLRERLLSASKEHQRESGMLRDKYEKALRAYQAEVEKLRAANEKYAQEVADLKAKVQQATSENMGLMDNWKSKLDSLALDHQKSLEDLKATLNSSPGAQQKEIGELKAVMEGIKMEHQLELGNLRAKHDLETAMHVKEKEGLRQKLQEAQEELAGLQQHWRAQLEAQAGQHRLELQEARDQGRGAELRVRELEKLDVEYRAQAQAIAFLKEQISLAEQKMLDYELLQRSEAQSKQEAERLREKLLATENRLQAVESLCSAQHTNMIESNDISGEKTRMKETMEGLQDKLNKRDKEVTALTSQTEMLRAQVSALESKCRSGEKKVDALQKEKRRLEVELEAMSRKTHDASGQLVLISQELLRKERSLNELRVLLLEANRHSPGPERDLSREVHKAEWRIKEQKLKDDIRGLREQLTGLDKEKSLSDQRRYSLIEPSSSSSPELLRLQHQLMSTEDALRDALDQAQQVERLMEAMRSCPDKSQATGNSGSANGIHQQDKAQKQERQENPGHSICRGPGPVGEKQRERTSTDPEGHCGAARSTPEPLQPAPAAPPPGRGQDCRFGEENSVTITYPPPRTIPHPDPPAGPGGFLKHDLPQKAVQPRPGPQDLQPGRPGHPGHPGHPGSFWSWFGEAEVIRPGPFPRRSCPEDPLGPLGTSLPSLSSPSSPGSLSEPRAIVPGRXXRRAPASPSGTKEGSPALRSQVGDPLFCFQAKAVPRASCPRTEPLSCSGTSSLQPVCPVRPHVQSAGRRGPSFPPGPQHTHSSELLAGG*