Part of scaffold_5 (Scaffold)

For more information consult the page for scaffold_5 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GTF2IRD1 ENSTTRG00000008796 (Bottlenosed dolphin)

Gene Details

GTF2I repeat domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008371, Bottlenosed dolphin)

Protein Percentage 80.25%
cDNA percentage 82.29%
Ka/Ks Ratio 0.35304 (Ka = 0.0825, Ks = 0.2338)

GTF2IRD1 ENSBTAG00000006212 (Cow)

Gene Details

general transcription factor II-I repeat domain-containing protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008161, Cow)

Protein Percentage 82.82%
cDNA percentage 85.28%
Ka/Ks Ratio 0.25815 (Ka = 0.1125, Ks = 0.4358)

GTF2IRD1  (Minke Whale)

Gene Details

GTF2I repeat domain containing 1

External Links

Gene match (Identifier: BACU012007, Minke Whale)

Protein Percentage 85.15%
cDNA percentage 88.1%
Ka/Ks Ratio 0.40662 (Ka = 0.105, Ks = 0.2582)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2409 bp    Location:861353..903993   Strand:+
>bmy_00385
ATGGCCCACGGCCACCTCCGCCTCCTCCTTTCCTCCATCCAGGCGACCATGGCCTTGCTGGGAAAGCGCTGCGACGTCTCCACAAACGGCTGTGGGCCTGACCGCTGGAACTCCGCCATCGCCCGCAAAGACGAGATCATCACCAGCCTCGTGTCTGCCTTAGATTCCATGTGCTCAGCGCTTTCCAAGCTGAACGCAGAAGTGGCCTGTGTCGCTGTGCATGATGAGAGCGCCTTCGTGGTCGGCACCGAGAAGGGCAGGATGTTCCTGAACGCACGCAAGGAGCTGCAGTCGGACTTCCTCAGGTTCTGCCGAGGGCCCCCGTGGAAGGAGCCGGAGGCAGAGCACCCCAAGAAGGTGCCTCGGGGTGAGGGTGGCAGCCGGAACATCCCACGGTCTGCCCTGGAACATGGCTCGGACGTGTACCTTCTGCGGAAGATGGTAGAGGAGGTGTTTGATGTTCTTTATAGCGAGGCCCTGGGCCGGGCCAGCGTGGTGCCGCTGCCCTACGAGAGGCTGCTCCGGGAGCCGGGGCTGCTGGCTGTGCAGGGGCTGCCCGAGGGCCTGGCCTTCCGGAGGCCGGCCGAGTACGACCCCAAGGCCCTTATGGCCATCCTGGAGCACAGCCACCGGATCCGCTTCAAGCTCAAGAGGCCGCTCGAGGATGGCGGGCGGGACTCGAAGGCCCTGGTGGAGCTGAACGGCATCTCCCTGATAGCCAAGGGGTCTCGGGACTGTGGCCTGCACGGCCAGGCCCCCAAGGGGCCACCCCAGGACCTGCCCCCAACCGCCACCTCCTCGTCCGTGGCCAGCTTCCTGTACAGCACCGCCCTTGCCAACCACACCGTGCGGGAGCTCAAGCAGGAGGCACCCGCCTGCCCTCTTGCCTCCAGTGACCTGGGCCTCGGCCGGCCCGGGCCTGAGCCCAAGGCCCCCGCTGCCCAAGACTTCCCAGACTGCTGTGGACAGAAACCCACTGGGCCTGGCGGTCCTCTCATTCAGAACGTCCATGCCTCTAAGCGCATCCTCTTCTCCATCGTCCATGACAAGTCAGAGAAGTGGGACGCCTTCATAAAAGAAACCGAGGACATCAACACGCTCCGGGAGTGTGTGCAGATCCTGTTTAACAGCAGATATGCGGAAGCCCTGGGCCTGGACCACATGGTCCCCGTCCCCTACAGGAAGATCGCCTGCGACCCGGAGGCTGTGGAGATCGTGGGCATCCCGGACAAGATCCCCTTCAAGCGCCCCTGCACCTACGGGGTCCCCAAGCTGAAGCGGATCCTGGAGGAGCGGCACAGCATCCACTTTGTCATTAAGAGGATGTTCGATGAGCGAATTTTCACAGGGAACAAGTTTACCAAAGACCCCACAAAGCTGGAGCCAGCCAGCCCGCCCGAGGACATCTCTGCGGAGGTCTCCCGTGCTGCCGTCCTGGACCTGGCTGGAACTGCTCGGTCGGACAAAAGCAGTCTCTCTGAAGACTGTGGGCCAGGAACCTCCGGGGAGCTGGGTGGGCTGAGACCCATCAAAATCGAGCCAGAGGATCTAGATATCATTCAGGTCACTGTCCCAGACCCTTCCCCAACCTCTGAGGAAATGACAGACTCGATGCCTGGACATGTGCCCTCGGAAGATTCTGGTTACGGGATGGAGATGCTGACTGACAAAGGCCCCAGCGAGGACCCGCGGCCTGAGGAGAGGCCTGTGGAGGACAGTCATGGTGACATGATCCGGCCTCTGCGGAAGCAGGTGGAGCTGCTTTTCAACACGCGATACGCCAAGGCCATTGGCATCTCGGAGCCTGTCAAGGTGCCCTACTCCAAGTTCCTGATGTACCCAGAGGAGCTGTTTGTGGTGGGGCTGCCTGAAGGCATCTCCCTCCGCAGGCCCAACTGCTTCGGGATTGCCAAGCTCCGGAAGATCCTGGAGGCCAGCAGCAGCATCCAGTTTGTCATCAAGAGGCCTGAGCTGCTCACCGAAGGAGTCAAAGAGCCCCTCACGGACAGCCAAGGTACCCTGCGCAGGGTCACGGGCCGAGGCGCGGGCCGGGCGTGGGAGGGGTCCCAGGCTTCTGCCATCACCCCTCCTCCTGCTTCCTCTGTCCTGGTCCCGTCTACCCTGGCATCCCCCCATTGCCCTCCCTGCTGGGTTTGCCCCCACCAGATACCACCTCTGTCCCGGGTCCCAGGAGCTGCCTGCTCACCCTGGCTTCTCTCCCCCCCGCCCCCAGAGAGGGATTCCGGGGACCCTCTTGTGGACGAGAGCCTGAAGAGACAGGGCTTTCAAGAAAATTATGACGCCAGACTCTCACGGATCGACATTGCCAACACGCTGAGGGAGCAAGTCCAGGATCTGTTCAATAAGAAATATGATAGATATAAGAAGGAGCCAGAAGCCGAAGCATAA

Related Sequences

bmy_00385T0 Protein

Length: 803 aa      View alignments
>bmy_00385T0
MAHGHLRLLLSSIQATMALLGKRCDVSTNGCGPDRWNSAIARKDEIITSLVSALDSMCSALSKLNAEVACVAVHDESAFVVGTEKGRMFLNARKELQSDFLRFCRGPPWKEPEAEHPKKVPRGEGGSRNIPRSALEHGSDVYLLRKMVEEVFDVLYSEALGRASVVPLPYERLLREPGLLAVQGLPEGLAFRRPAEYDPKALMAILEHSHRIRFKLKRPLEDGGRDSKALVELNGISLIAKGSRDCGLHGQAPKGPPQDLPPTATSSSVASFLYSTALANHTVRELKQEAPACPLASSDLGLGRPGPEPKAPAAQDFPDCCGQKPTGPGGPLIQNVHASKRILFSIVHDKSEKWDAFIKETEDINTLRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIVGIPDKIPFKRPCTYGVPKLKRILEERHSIHFVIKRMFDERIFTGNKFTKDPTKLEPASPPEDISAEVSRAAVLDLAGTARSDKSSLSEDCGPGTSGELGGLRPIKIEPEDLDIIQVTVPDPSPTSEEMTDSMPGHVPSEDSGYGMEMLTDKGPSEDPRPEERPVEDSHGDMIRPLRKQVELLFNTRYAKAIGISEPVKVPYSKFLMYPEELFVVGLPEGISLRRPNCFGIAKLRKILEASSSIQFVIKRPELLTEGVKEPLTDSQGTLRRVTGRGAGRAWEGSQASAITPPPASSVLVPSTLASPHCPPCWVCPHQIPPLSRVPGAACSPWLLSPPPPERDSGDPLVDESLKRQGFQENYDARLSRIDIANTLREQVQDLFNKKYDRYKKEPEAEA*