Part of scaffold_6 (Scaffold)

For more information consult the page for scaffold_6 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMCC1 ENSTTRG00000011283 (Bottlenosed dolphin)

Gene Details

transmembrane and coiled-coil domain family 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010698, Bottlenosed dolphin)

Protein Percentage 97.96%
cDNA percentage 97.96%
Ka/Ks Ratio 0.26853 (Ka = 0.0128, Ks = 0.0476)

TMCC1 ENSBTAG00000006614 (Cow)

Gene Details

transmembrane and coiled-coil domains protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008676, Cow)

Protein Percentage 92.91%
cDNA percentage 88.02%
Ka/Ks Ratio 0.06075 (Ka = 0.0402, Ks = 0.6618)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1701 bp    Location:93485..255389   Strand:+
>bmy_00399
ATGGATCTGGAAAGCCAGAACGCGTGTGCTGAGATTGATGGTGTCCCCACCCACCCCACAGCTCTGAATCGTGTCCTGCAGCAGATCCGAGTGCCACCCAAGATGAAGAGAGGGACGAGCTTGCATAGTAGGCGGGGCAAGCCAGAGGCCCCAAAGGGAAGTCCCCAAATCAACAGGAAGTCTGGCCAGGAGATGGCAACTGTTATGCAGTCCGGCCGACCCAGATCTTCATCCACTACTGATGCTCCTACCAGCTCCACTGTGATGGAAATAGCTTGTGCTGCTGCTGCTGCTGCTGCTGCGTGTCTGCCAGGGGATGAGGCATCTGCAGAACGGGCTCACATGAACCTATTAAATCCAAACATCGGGCCTGAAGTACATCTGGCAGTGCAAATCCTCAATGATGTATTTCACATCGAGCGGTTGGAAGTAAGCAGCCTCGCCCAGACTTCCAGTGCGGTGGCCTCCAGCACTGATGGCAGCCTCCACACAGACGCTGTGGATGGAACACCAGACCCTCAGCGCACAAAGGCTGCTATTGCTCACTTGCAGCAGAAGATCCTGAAGCTCACAGAACAAATCAAGATTGCACAAACAGCCCGGGACGACAACGTTGCCGAGTACCTGAAGCTTGCCAACAGTGCGGACAAGCAGCAGGCCGCCCGTATCAAGCAGGTCTTTGAGAAGAAGAACCAGAAATCTGCCCAGACCATCCTCCAACTACAAAAGAAGCTTGAGCACTACCACAGGAAGCTCCGAGAGGTGGAGCAGAATGGGATCCCCCGGCAGCCAAAGGACGTCTTCAGGGACATGCACCAGGGTCTGAAGGATGTGGGAGCAAAGGTGACCGGCTTCAGTGAAGGTGTAGTGGACAGTGTTAAAGGTGGACTCTCCAGCTTCTCCCAGGCAACCCATTCAGCAGCAGGGGCCGTGGTCTCTAAGCCCAGAGAGATCGCTTCACTAATTCGGAATAAGTTTGGCAGTGCAGACAATATCCCTAACCTGAAGGACTCTTTAGAGGAAGGGCAAGTGGATGATGGGGGAAAGGCTTTGGGAGTAATTTCAAACTTTCAGTCCAGCCCCAAATATGGTAGTGAGGAAGATTGTTCTAGTGCCACGTCAGGCTCAGTGGGAGCCAACAGCACCACTGGAGGCATTGCTGTAGGAGCATCCAGCTCCAAAACAAACACCCTGGACATGCAGAGCTCAGGATTTGATGCACTACTACATGAGATCCAGGAGATCCGGGAAACCCAGGCCAGACTAGAGGAATCCTTTGAGACCCTCAAGGAACATTATCAGAGGGACTATTCATTAATAATGCAGGCCTTACAGGAGGAGCGATATAGATTGGAGGTGCTTACTATGAAAGCCATCATTCTCCAGGAGGCCCTGGAGGCGTGCCAGACCCGCATCTCCAAGATGGAGTTGCAGCAGCAGCAGCAGCAGGTGGTACAGCTGGAGGGGCTGGAGAATGCCACCGCCCGGAACCTTCTGGGCAAACTCATCAACATCCTCCTGGCTGTCATGGCAGTCCTTCTGGTCTTTGTCTCCACGGTAGCCAACTGCGTGGTTCCCCTCATGAAGACTCGCAACAGGACGTTCAGCACTTTATTCCTTGTGGTTTTCATTGCCTTTCTCTGGAAGCACTGGGATGCCCTCTTCAGCTACGTGGATCGGTTCTTTTCCTCCTCCAGATGA

Related Sequences

bmy_00399T0 Protein

Length: 567 aa      View alignments
>bmy_00399T0
MDLESQNACAEIDGVPTHPTALNRVLQQIRVPPKMKRGTSLHSRRGKPEAPKGSPQINRKSGQEMATVMQSGRPRSSSTTDAPTSSTVMEIACAAAAAAAACLPGDEASAERAHMNLLNPNIGPEVHLAVQILNDVFHIERLEVSSLAQTSSAVASSTDGSLHTDAVDGTPDPQRTKAAIAHLQQKILKLTEQIKIAQTARDDNVAEYLKLANSADKQQAARIKQVFEKKNQKSAQTILQLQKKLEHYHRKLREVEQNGIPRQPKDVFRDMHQGLKDVGAKVTGFSEGVVDSVKGGLSSFSQATHSAAGAVVSKPREIASLIRNKFGSADNIPNLKDSLEEGQVDDGGKALGVISNFQSSPKYGSEEDCSSATSGSVGANSTTGGIAVGASSSKTNTLDMQSSGFDALLHEIQEIRETQARLEESFETLKEHYQRDYSLIMQALQEERYRLEVLTMKAIILQEALEACQTRISKMELQQQQQQVVQLEGLENATARNLLGKLINILLAVMAVLLVFVSTVANCVVPLMKTRNRTFSTLFLVVFIAFLWKHWDALFSYVDRFFSSSR*