Sequence detailsbmy_00400 (Coding sequence)

Part of scaffold_6 (SequenceType object (1))

For more information consult the page for scaffold_6 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PLXND1ENSTTRG00000011279 (Bottlenosed dolphin)

Gene Details

plexin D1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000010696, Bottlenosed dolphin)

Protein Percentage 85.67%
cDNA percentage 87.0%
Ka/Ks Ratio 0.21669 (Ka = 0.048, Ks = 0.2216)

PLXND1ENSBTAG00000001814 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000002375, Cow)

Protein Percentage 89.81%
cDNA percentage 88.5%
Ka/Ks Ratio 0.08114 (Ka = 0.0569, Ks = 0.7018)

Additional orthologs identified in other species via the OPTIC pipeline.

PLXND1 (Human)   Plxnd1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 4212 bp    Location:301052..336073   Strand:+
Raw sequence 
>bmy_00400
ATGATTGCTGTGGAGACCTCGCCGGGACAGGAGGGACACCTCTTGGGTGTCGGCAGCTCCTGCATGCCCGGAACGTACCCATCTCCTTGGGGCAGCTCCGTGACTGAAGCCGAGGGCAGGGGTCGACCTGGGCTCAGAGATGGGGTCCTGCTTATGTTGGGGCCTGAGCCCAGCGCTGGGCATACAGAACCGGAGCAGGACTTTAAAAGCACTGATGCTGAGGCCGGAGACCACACAGCCAGCTGTGTGGGCAGGGAGCCGGAGAAGCTGCAGCCGGAACAGCTGGACTGCGGGGCCGCCCACCTGCAGCACCCCTTGTCCATCCTGCAGCCCCTGAAGGCCTTGCCCGTGTTCCGAGCCCCGGGCCTCTCCTCCGTGGCCGTGGCCAGCGTGGGCAACTACACGGTGGTCTTCCTGGGCACAGTCAGTGGCCGGCTGCTGAAGATGGCCAGGGTGAAAGTCGCCGCGTGTGCTGTGCACACCACCTGCGGGGACTGCGTGGGTGCAGCCGACGCCTACTGCGGCTGGTGTGCCCTGGAGACGCGGTGCACCTTGCAGCAGGACTGCGCCAACTCCAGCCAGCCGCGTTTCTGGACCAGTGCCAGCGAGGGCCCCGGCCGCTGTCCCGCCATGACCGTCCTGCCGGCCGAGATCGATGTGCACCAAGAGTACCCGGGTATGATCCTGCAGATCTCAGGGAGCCTGCCCAGCCTCAGCGGCATGGAGATGGCCTGTGACTATGGAAACGACATCCACACTGTGGCTCGGGTCCCGGGCCCTGCCTTTGGCCACCAGATCGCCTACTGCAACCTCCTGCCGAGGAACCGGTTCCCGCCCTTCCCACCCCACCGAGACCATGTGACCGTCGAGATGGCGGTGAGGGTCAATGGGCAGAACATCGTCAGGGCCAGTTTCACCATCTACGACTGTGGCCGCGTTGGGCAGTGGCCCTGTTTCTGGTGCACCCAGCAGCACTCCTGTGTTTCCAACCAGTCTCGGTGTGAGGCCTCACCAAATCCCACGAGCCCTCAGGACTGCCCGCAGATCCTGCCCTCAGCCCTGGCTCCCATGCCCACGGGCAGCTCCCAGAGCATCCCGGTGCATCTGGCCAATGCCGCCTTCTTCCAGGGTGCAGCGCTTGAATGTAGCTTTGGTCAAGAAGAGATCTTTGAGGCTGTGTGGGTGAATGAATCAGCTGTATGCTGCAACCAAGTGGTGCTGCACACAACCCAGAAGAGCCAGGTGTTTCCACTCAGCCTCCAACTAAAGGGGCGGCCAGCCCGATTCCTGGACAGCCCTGACCACATGACAGTGGAGGTCTATAACTGCGCCATGGGCAGCCCCGACTGTTCCCAGTGCCTGGGCCGGGAGGACCTGGGCCACCTGTGTGTGTGGAGTGACGGCTGCCGCCTGCGGGGGACCCTGCAGCCCCTGCCTGACACCTGCCCCGCCCCCGAGATCCGAGCGATTGAGCCCCTGAGTGGCCCCTTGGATGGCGGGACCCTGCTGACCATCCGCGGCAGGAACCTGGGCCGGCGGCTCAGCGACGTGGTCCGTGGAGTGTGGATTGGCAGCGTGGCCTGTGAGCCGCTGGCCGACAGATACACGGTGTCAGAGGACTGCCCCTGGTTCACTCCCTGGAGCCTGCCATGGGCCCCAAGGCAGGGGGCACCAGGATCACCATCCACGGGAGCGACCTCCATGCGCACGGACACCAGCATCACCTGCACGGTGCCTGGGGGCGCCCTGCCGGCCCCCGTGCCCGTCTGCGTGCGCTTCGAGCGCCGCGGCTGCGTGCACGGCAACCTCACCTTCTGGTACAAGCGGAACCCGGTCATCACGGCCATCAGTCCCCGCCGCAGCCACGTCAGTGGCGGCAGGACCATCACGGTGGCCGGCGAGCGTTTCCACATGGTGCAGAAGGTGTCCATGGCCGTGCACCACATCGGCCGGGAGCCCACGCTCTGCAAGGTTCTTAACTCCACCCTCATCACCTGCCCATCGCCCGGGGCCCTGAGCAACGCCTCAGCCCCCGTGGACTTCTTCCTCAACGGCCGGGCCTACGCAGACGAGGCAGCCGTGGACGAGGAGCTCCTGGACCCCGAGGAGGCCCAGCGGGGCAGCAGGTTCCGCCTGGACTACCTCCCTGACCCACAGTTCTCCACGGCGAAGAGGGAGAAGTGGATCAAGCACCACCCCGGGGAGCCCCTCACCCTGGTCATCCACAAGGAGCAGGACGGCCTGGGCCTCGAGAGCCACGAGTACCGGGTCAAGATTGGCCAGGTGGCCTGTGACATCCAGATCGTCTCCGAGAGAGTCATCCACTGCTCGGTCAACGAGTCCCTGGGCACAGCAGAGGGGCAGCTGCCCATCACAAGCCGCCGCGCTGAGCGCTACTGGCAGAAGACACTGGTGCAGATGGAGGAGATGGAATCCCAGATCCGAGAGGAGATCCGTAAAGGCTTCGCTGAGCTGCAGACGGACATGACGGATCTGACCAAGGAGCTGAACCGCAGCCAGGGCATCCCCTTCCTGGAGTACAAGCACTTTGTGACCCGCACCTTCTTCCCTAAGTGCTCCTCCCTCTATGAAGAGCGTTACGTCCTGCCCTCCCAGACCCTCAACTCCCCGGGCAGCTCCCTGGTGCAGGAGACCCACCCACTGCTGGGAGAGTGGAAGATCCCCGAGAGCTGCCGGCCCAACATGGAGGAGGGCATCAGCCTGTTCTCCTCGCTGCTCAACAACAAGCACTTCCTCATTGTCTTCGTCCACGCGCTGGAGCAACAGAAGGACTTCGCGGTGCGGGACAGGTGCAGCCTGGCCTCCCTGCTGACCATTGCACTCCACGGCAAGCTCGAGTACTATACGGGCATCATGAAGGAGCTGCTGGTGGACCTCATCGACGCCTCGGCTGCCAAGAACCCCAAGCTCATGCTGAGGCGCACGGAGTCCGTGGAGACGGTCGGGGAGCCGTTCTTCCTGCTCCTGTGCGCCATCAAGCAGCAGATCAACAAGGGCTCCATCGACGCCATCACAGGCAAGGCCCGCTACACGCTCAACGAGGAGTGGCTGCTGCGGGAGAACATCGAGGCCAAGCCCCGGAATCTGAACGTGTCCTTCCAGGGCTGCGGTATGGACTCACTGAGCGTGCGGGCCATGGACACAGACACGCTGACGCAGGTGAAGGAGAAGATCCTGGAAGCCTTCTGCAAGAACGTGCCCTACTCCCAGTGGCCGCGTGCCGAGGACGTCGACCTAGAGTGGTTCGCCTCGAGCACGCAGAGCTACATCCTGCGGGACCTGGACGACACCTCGGTGGTCGAGGATGGCCGCAAGAAGCTCAACACGCTGGCCCACTACAAGATCCCTGAAGGTGCCTCCCTGGCCATGAGCCTCACAGACAAGAAGGACAACACCCTGGGCCGAGTAAAAGACTTGGACACAGAGAAGTATTTCCATTTGGTGCTGCCCACGGATGAGCTGGCAGAGCCCAAGAAGTCCCACCGGCAGAGCCACCGCAAGAAGGTGCTACCGGAGATCTACCTGACCCGCCTGCTGTCCACCAAGGGCACGCTGCAGAAGTTTCTGGATGACCTGTTCAAGGCCATTCTGAGCATCCGTGAAGACAAGCCCCCACTGGCTGTCAAGTACTTCTTTGACTTCCTGGAAGAGCAAGCAGAGAAGAGGGGGATCTCAGACCCTGACACCCTACACATCTGGAAGACCAACAGCCTCCCTCTCCGGTTCTGGGTGAACATCCTGAAAAACCCACAGTTTGTCTTTGACATCGAGAAGACGGACCACATCGATGCCTGCCTCTCAGTCATCGCACAGGCCTTCATCGACGCCTGTTCCATCTCCGACCTGCAGCTGGGCAAGGACTCACCAACCAACAAGCTCCTCTACGCCAAGGAGATTCCCGAGTACCGGAAAATCGTGCAGCGCTACTACAAACAGATCCATGACATGACTCCGCTCAGCGAGCAGGAAATGAACGCGCACCTGGCGGAGGAGTCACGGAAATACCAGAATGAGTTCAACACCAACGTGGCCATGGCAGAGATTTATAAATACGCCAAGAGGTATCGCCCACAGATCGTGAGCGCCCTGGAGGCAAACCCCACAGCCCGGAGGACGCAGCTGCAGCACAAGTTTGAGCAGGTGGTGGCCCTGATGGAGGACAACATCTACGAGTGCTGCAGCGAGGCCTGA

Related Sequences

bmy_00400T0 SequenceType object (3)

Length: 1404 aa      View alignments
>bmy_00400T0
MIAVETSPGQEGHLLGVGSSCMPGTYPSPWGSSVTEAEGRGRPGLRDGVLLMLGPEPSAGHTEPEQDFKSTDAEAGDHTASCVGREPEKLQPEQLDCGAAHLQHPLSILQPLKALPVFRAPGLSSVAVASVGNYTVVFLGTVSGRLLKMARVKVAACAVHTTCGDCVGAADAYCGWCALETRCTLQQDCANSSQPRFWTSASEGPGRCPAMTVLPAEIDVHQEYPGMILQISGSLPSLSGMEMACDYGNDIHTVARVPGPAFGHQIAYCNLLPRNRFPPFPPHRDHVTVEMAVRVNGQNIVRASFTIYDCGRVGQWPCFWCTQQHSCVSNQSRCEASPNPTSPQDCPQILPSALAPMPTGSSQSIPVHLANAAFFQGAALECSFGQEEIFEAVWVNESAVCCNQVVLHTTQKSQVFPLSLQLKGRPARFLDSPDHMTVEVYNCAMGSPDCSQCLGREDLGHLCVWSDGCRLRGTLQPLPDTCPAPEIRAIEPLSGPLDGGTLLTIRGRNLGRRLSDVVRGVWIGSVACEPLADRYTVSEDCPWFTPWSLPWAPRQGAPGSPSTGATSMRTDTSITCTVPGGALPAPVPVCVRFERRGCVHGNLTFWYKRNPVITAISPRRSHVSGGRTITVAGERFHMVQKVSMAVHHIGREPTLCKVLNSTLITCPSPGALSNASAPVDFFLNGRAYADEAAVDEELLDPEEAQRGSRFRLDYLPDPQFSTAKREKWIKHHPGEPLTLVIHKEQDGLGLESHEYRVKIGQVACDIQIVSERVIHCSVNESLGTAEGQLPITSRRAERYWQKTLVQMEEMESQIREEIRKGFAELQTDMTDLTKELNRSQGIPFLEYKHFVTRTFFPKCSSLYEERYVLPSQTLNSPGSSLVQETHPLLGEWKIPESCRPNMEEGISLFSSLLNNKHFLIVFVHALEQQKDFAVRDRCSLASLLTIALHGKLEYYTGIMKELLVDLIDASAAKNPKLMLRRTESVETVGEPFFLLLCAIKQQINKGSIDAITGKARYTLNEEWLLRENIEAKPRNLNVSFQGCGMDSLSVRAMDTDTLTQVKEKILEAFCKNVPYSQWPRAEDVDLEWFASSTQSYILRDLDDTSVVEDGRKKLNTLAHYKIPEGASLAMSLTDKKDNTLGRVKDLDTEKYFHLVLPTDELAEPKKSHRQSHRKKVLPEIYLTRLLSTKGTLQKFLDDLFKAILSIREDKPPLAVKYFFDFLEEQAEKRGISDPDTLHIWKTNSLPLRFWVNILKNPQFVFDIEKTDHIDACLSVIAQAFIDACSISDLQLGKDSPTNKLLYAKEIPEYRKIVQRYYKQIHDMTPLSEQEMNAHLAEESRKYQNEFNTNVAMAEIYKYAKRYRPQIVSALEANPTARRTQLQHKFEQVVALMEDNIYECCSEA*