Part of scaffold_6 (Scaffold)

For more information consult the page for scaffold_6 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

H1FOO ENSTTRG00000011276 (Bottlenosed dolphin)

Gene Details

H1 histone family, member O, oocyte-specific

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010690, Bottlenosed dolphin)

Protein Percentage 91.51%
cDNA percentage 93.71%
Ka/Ks Ratio 0.54563 (Ka = 0.0558, Ks = 0.1022)

BT.36838 ENSBTAG00000001812 (Cow)

Gene Details

histone H1oo

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002369, Cow)

Protein Percentage 80.32%
cDNA percentage 87.63%
Ka/Ks Ratio 0.46995 (Ka = 0.11, Ks = 0.2341)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 960 bp    Location:343814..340037   Strand:-
>bmy_00401
ATGTCCTGCTGTCTGTCCGTAGGCCTGAGCCGGAGCAGCGTCCAAGAGCCCCGCCGCCACCCTCCGGTGCTGCGCATGGTGCTGGAGGCGCTGCAGGCGGGGGAGCAGCGCCGGGGTACCTCGGTGGCGGCCATCAAGGTTTACATCCTGCAGAAGTACCCAACGGTGGACGTCCTCCGGCTCAAGTACCTGCTGAAGCAGGCCTTGGCCACAGGCATGCACCGCGGCCTCCTCGTCAGGCCCGTCAACTCCAAGGCCCGGGGAGCCACTGGCAGCTTCAAATTAGTTTCCAAAGACAAAAGGAAAATCCAGCCCAGGAAGACGTCCACCATGACGGCCTCCAGGAGGCCTGGTCAAGGTGAGGGAAAGGACCCCAAGAAACCAAGTGAGTCAAAGAAGAACCCACCCAACCCAGGCGAGGTGAAAAAAGGATCCAGGAAGCTGGGAGAGGGGAGGACAGCTACCCCCAAACCAGGTGCAGCCAAGAAGGCCCCCAAGAAAGGCCAGCAGACCAAAGACCAAGAGGCAAGACTGGGTGAGGCCAAGAAGTCCTCCCAACAGCCAGACAAGGCCACACAGGCCCCTCCCATTGCCAGTGGGCCCGGCGGGAAGTCAGAGGTCAAAGGTGGAAGGAGCAGCCAAGCAGATACCAAGGCCCACAGGAAAACAAAGCCTGGGAGTCAGAGTTCCAAACCCACGGTCACCAAGGGTGAGAATGGTGCTGCTTCCCCAGCCAAAAAGAAGATGGGGAGCAAGGTCCCTAAAAAGGCTGCTGCCCAGGGGGCCGGGGAGGGGCCTAAAGCCAAGGCCCCTGTTCCTCCCAAGGGCAGTGAGTCCAAGATGGAGCCTGTACCACTGGCCAGGAAGGCAGAGGCCCCTAAAGGCCCGAGAAAGCCTGGCATTCCCACCAAGTCCTCATCGTCCAAAGCGGCCAGTAAGAAGGCAGAAGCCGAGAGCTAG

Related Sequences

bmy_00401T0 Protein

Length: 320 aa      View alignments
>bmy_00401T0
MSCCLSVGLSRSSVQEPRRHPPVLRMVLEALQAGEQRRGTSVAAIKVYILQKYPTVDVLRLKYLLKQALATGMHRGLLVRPVNSKARGATGSFKLVSKDKRKIQPRKTSTMTASRRPGQGEGKDPKKPSESKKNPPNPGEVKKGSRKLGEGRTATPKPGAAKKAPKKGQQTKDQEARLGEAKKSSQQPDKATQAPPIASGPGGKSEVKGGRSSQADTKAHRKTKPGSQSSKPTVTKGENGAASPAKKKMGSKVPKKAAAQGAGEGPKAKAPVPPKGSESKMEPVPLARKAEAPKGPRKPGIPTKSSSSKAASKKAEAES*