Part of scaffold_6 (Scaffold)

For more information consult the page for scaffold_6 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RHO ENSTTRG00000011273 (Bottlenosed dolphin)

Gene Details

Rhodopsin

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010688, Bottlenosed dolphin)

Protein Percentage 97.35%
cDNA percentage 97.64%
Ka/Ks Ratio 0.09741 (Ka = 0.0106, Ks = 0.1084)

RHO ENSBTAG00000001310 (Cow)

Gene Details

Rhodopsin

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001730, Cow)

Protein Percentage 91.74%
cDNA percentage 92.13%
Ka/Ks Ratio 0.08736 (Ka = 0.0399, Ks = 0.4571)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1020 bp    Location:379618..373752   Strand:-
>bmy_00402
ATGAACGGGACGGAGGGCCTGAACTTCTACGTGCCTTTCTCTAACAAGACGGGCGTGGTGCGCAGCCCCTTCGAGTACCCGCAGTACTACCTGGCTGAGCCGTGGCAGTTCTCCGTGCTGGCCGCCTACATGTTCCTGCTGATCGTGCTCGGCTTCCCCATCAACTTCCTCACGCTCTACGTCACGGTCCAGCACAAGAAGCTGCGCACGCCTCTCAACTACATCCTGCTCAACCTGGCCGTGGCCAACCTCTTCATGGTCTTTGGTGGCTTCACCACCACCCTCTACACCTCTCTGCACGCGTACTTCGTCTTGGGGCCCACGGGATGCAACTTGGAGGGCTTCTTTGCCACCCTGGGCGGTGAAATTGCCCTGTGGTCCTTGGTGGTCCTGGCCATCGAGCGGTACGTGGTGGTGTGTAAGCCCATGAGCAACTTCCGCTTCGGGGAGAACCATGCCATCATGGGCCTCGCCGTCACCTGGATCATGGCTCTGGCCTGTGCCGCGCCCCCCCTCGTCGGCTGGTCCAGGTACATCCCGGAGGGAATGCAGTGCTCRTGCGGGATTGACTACTACACGCTCTCGCCAGAGGTCAACAATGAGTCCTTCGTCATCTACATGTTCGTGGTCCACTTCTCCATCCCCCTGGTCATCATCTTCTTCTGCTACGGGCAGCTGGTCTTCACAGTCAAGGAGGCGGCTGCCCAACAGCAGGAGTCGGCCACCACGCAGAAGGCCGAGAAGGAGGTCACTCGCATGGTCGTCATCATGGTCGTGGCTTTCCTGATCTGCTGGTTGCCTTATGCCAGCGTGGCGTTCTACATTTTCATCCACCAGGGCTCCGACTTTGGCCCCATCTTCATGACCATCCCGGCGTTCTTTGCCAAGAGTTCCTCCATCTACAACCCCTTCCGGAACTGCATGCTCACCACCCTGTGCTGTGGCAGGAGCCCACTGGGTGACGACGAGGCCTCCACCACTGCCTCCAAGACAGAGACCAGCCAGGTGGCGCCTGCCTAA

Related Sequences

bmy_00402T0 Protein

Length: 340 aa      View alignments
>bmy_00402T0
MNGTEGLNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSVLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSLHAYFVLGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAVTWIMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLSPEVNNESFVIYMFVVHFSIPLVIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVVIMVVAFLICWLPYASVAFYIFIHQGSDFGPIFMTIPAFFAKSSSIYNPFRNCMLTTLCCGRSPLGDDEASTTASKTETSQVAPA*