Sequence detailsbmy_00412 (Coding sequence)

Part of scaffold_6 (SequenceType object (1))

For more information consult the page for scaffold_6 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TSEN2ENSBTAG00000037980 (Cow)

Gene Details

tRNA-splicing endonuclease subunit Sen2

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000041558, Cow)

Protein Percentage 78.0%
cDNA percentage 82.21%
Ka/Ks Ratio 0.27272 (Ka = 0.1332, Ks = 0.4883)

Additional orthologs identified in other species via the OPTIC pipeline.

TSEN2 (Human)   Tsen2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1566 bp    Location:774743..737238   Strand:-
Raw sequence 
>bmy_00412
ATGGCAGAGGCAGTTTTCCGTCCCCCAAAGAGGAAAAGAAGAGYGTATGAGAGCTATGAGTCTCCACTGCCGATCCCTTTCGGTCAGGAGTGTGGTCCCAAGAAGGACTTTAGAATATTCCGGGCCGAGATGATAAACAACAATGTGATTGTGAGGAACGCAGAAGATATGGAGCAGCTCTATGGGAAGGGTTATTTTGGAAAAGGTATCCTGTCCAGAAGCCGTCCAAACTTCACAATTTCAGATCCTAAGCTGGTTGCTAAATGGAAAGATATGAAGACAGACATGCCTGTAATCACGTCAAAAAAGTATCAGCGTAGCGTGGAATGGGCCACAAACCTCATGCGAAGACAAGGCCAGGATGAGAGCACAGTGCGTAGACTTCTTGAGGATTACACGAAGCCCCTTCAGCATCTTTGTCTGCAAAGGAATGAAGAGGTCCAGTTGTGCAATGAGCTGAACTCTGAAATGGTTTCCAAAACGGAAGGCACAGAAGATAGAGAGAAACTTTCTGCCACGAATGGGGTTGCAGGAAAGTCGCGTGATCTGGAGGATCCCAGCAAGCGATCAGACCGCCTGCAGGAGGGCTCCGGGCCTGACCCGATACCTACCCACGGCTCGGGTGAACACGTGGCGGAGGTCACCGCTCCTCTGCCCCACGTCCACTGCGGCAAACAAGATGCTCTCCTCCCACCCTCTGGCGCTCAGCCTGGGGACAGCAGCCAACGAGCGGGTCTGGTCCCGGCCAGAGAGAGAGGGCCTGAGCACCACTACGTGCTGGTGGAGGAAGTCGTGTGTGACGTGAGTGAGAGGGAAGACGCCCCAGGTGGGGACTTGTCGCCAAAAAAGAGACTGATATGCAGAAGAAATCCATTTAGGATCTTTGAGTACTTGCAGCTCAGCCTGGAAGAGGCCTTCTTCCTGGTCTATGCTCTGGGATGTCTAAGTATTTACTATGAGAAGGAGGCTTTGACGATTGTGAAGCTCTGGAACACCTTCCGCGTAGTTCAGCCCACGTTCCGGACTACGTACATGGCGTACCATCACTTCCGAAGCAAGGGCTGGGTGCCCAAAGCGGGACTTAAGTACGGAACAGACTTGCGTCACAGCGTTTCAATAAGTGGCGTAGCTGTTGCACTGCCGTCACTGGCTCCCCGCCCTGCTCTCCTTTTCCTGCCCCGTGAGAATAGCCGCTCCATTTACTCTGTCATCATCGAGCTGGTGGATGACCGTTTTGAGGGCTCTCCTCGCAGACCTCTCAGCTGGCGGTCCCTGGCTGCCTTGAGCAGAGTTTCAGTCAGTGTCTCCAAGGAATTTATGCTGTGCTATTTGATTAAACCCTCCGCCATGACTGACAAAGAAATGGAGTCACCAGAATGTATGAAACAAATTAAAGTTCAGGTAGGTGAACTCGGAGACAAATTCATGTCGTCACAAAGGCTCTGCCCAGCGTATTGCGTCCCTTGGAACCTGTGGTCCCGAGACAGGACAGGAAAAGCATCTCGCCTCGGCGACGAGAGCCCTCTCAGGTCCTTCCCCTCTGAGCCCAGCCTCGCTCCCCCTTAA

Related Sequences

bmy_00412T0 SequenceType object (3)

Length: 522 aa      
>bmy_00412T0
MAEAVFRPPKRKRRXYESYESPLPIPFGQECGPKKDFRIFRAEMINNNVIVRNAEDMEQLYGKGYFGKGILSRSRPNFTISDPKLVAKWKDMKTDMPVITSKKYQRSVEWATNLMRRQGQDESTVRRLLEDYTKPLQHLCLQRNEEVQLCNELNSEMVSKTEGTEDREKLSATNGVAGKSRDLEDPSKRSDRLQEGSGPDPIPTHGSGEHVAEVTAPLPHVHCGKQDALLPPSGAQPGDSSQRAGLVPARERGPEHHYVLVEEVVCDVSEREDAPGGDLSPKKRLICRRNPFRIFEYLQLSLEEAFFLVYALGCLSIYYEKEALTIVKLWNTFRVVQPTFRTTYMAYHHFRSKGWVPKAGLKYGTDLRHSVSISGVAVALPSLAPRPALLFLPRENSRSIYSVIIELVDDRFEGSPRRPLSWRSLAALSRVSVSVSKEFMLCYLIKPSAMTDKEMESPECMKQIKVQVGELGDKFMSSQRLCPAYCVPWNLWSRDRTGKASRLGDESPLRSFPSEPSLAPP*