Sequence details bmy_00424 (Coding sequence)

Part of scaffold_6 (Scaffold)

For more information consult the page for scaffold_6 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HRH1 ENSBTAG00000001447 (Cow)

Gene Details

histamine H1 receptor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001896, Cow)

Protein Percentage 86.04%
cDNA percentage 89.12%
Ka/Ks Ratio 0.1972 (Ka = 0.0703, Ks = 0.3565)

HRH1  (Minke Whale)

Gene Details

histamine receptor H1

External Links

Gene match (Identifier: BACU015178, Minke Whale)

Protein Percentage 96.41%
cDNA percentage 98.24%
Ka/Ks Ratio 0.51707 (Ka = 0.0139, Ks = 0.0269)

Additional orthologs identified in other species via the OPTIC pipeline.

HRH1 (Human)   Hrh1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1464 bp    Location:1767557..1766094   Strand:-
Raw sequence 
>bmy_00424
ATGACCCTTCCCAATTCCTCCAGCGTCTTGGAAGACAAGATGTGTGAGGGGAACAAGACCACCACGCCCAACCCCCAAATGATTCCCCTGGTGGTGGTCCTGAGCGCCATCTCCTTGGTCACAGTGGCACTCAACCTGCTGGTCCTGTATGCTGTGCGCAGCGAGCGGAAGCTACACACGGTGGGGAATCTGTACATCGTCAGCCTCTCGGTGGCCGATCTGATCGTGGGGGCCGTCGTCATGCCCGTGAACATCCTCTACCTCCTCATGTCCAGGTGGTCCCTGGGGCGCCCTCTCTGCCTCTTTTGGCTTTCCATGGACTATGTGGCCAGCACAGCATCCATTTTCAGCGTCTTCATCTTGTGCGTTGATCGCTACCGCTCTGTGCAGCAGCCCCTCAGATACCTGAGGTATCGTACCAAGACCCGAGCGTCGGCCACCATCTTGGCGGCCTGGTTTCTCTCCTTCCTGTGGGTTATTCCCATTCTGGGCTGGCATCGCTTCATGTCGAAGACCTCAGGGCACCGGGAGGACAAGTGCGAGACGGACTTCTACAATGTCACCTGGTTCAAGGTCATGACTGCCATCATCAACTTCTACCTGCCCACCTTGCTCATGCTCTGGTTCTATGCTAGGATCTACAAGGCTGTACGGCAGCACTGTCAGCACCGGGAGCTCATCAGTGGATCCCTCCCGTCCTTCTCTGAAGATAAGCTGAAGCCAGAGGACCTCAGCGTGGGTGCTAAGAAACCAGGGAAGCAGTCTCCCTGGGAGGTTCTGAAAAGGAAGCCGAAAGATGCCGGTGGTGGACCTGTCTTGAAGCCAGCATCCCAAGACCCAAAGGAGATAAAGTCTCCAGGTGTCTTCAGCCAAGAGAAGGATGGAGAACTGGACAAATTCCATTGCTCCCCACTTAACATTGTGCAGACGCAGATGGAGGCAGACGGGAGTGGCAGGGAACACGTAGCCATCAACCAGAGCCAGAGCCAGCTCGAGATGGGCRAGCAGGGCCTGAACATGCATGGGGCCAAGGAGGTATTAGAGGATCAGATCCTAGGTGATAGCCAGTCCTTCTCCCGGACAGACTCAGACACCCCCCCAGAGTTGGCACCCGGGAAAGCCAAATCGAAAAGTGAGTCTAGCACAGGCCTGGATTATATCAAGTTCACCTGGAAGAGGCTTTGCTCACATTCAAGACAGTACGTGTCTGGGTTGCACATGAACCGAGAACGGAAGGCCGCCAAACAATTGGGTTTTATCATGGTGGCCTTCATCGTTTGCTGGATTCCTTACTTCATCTTCTTCATGGTCATTGCCTTCTGCGAGAGCTGCTATAACCAACATGTGCWCATGTTCACCATCTGGCTGGGCTACATCAACTCCACGCTGAACCCCCTCATCTACCCCTTGTGCAACGAGAACTTCAAGAAGACGTTCAAGAAAATTCTGCACATTCGCTCCTAA

Related Sequences

bmy_00424T0 Protein

Length: 488 aa      View alignments
>bmy_00424T0
MTLPNSSSVLEDKMCEGNKTTTPNPQMIPLVVVLSAISLVTVALNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPVNILYLLMSRWSLGRPLCLFWLSMDYVASTASIFSVFILCVDRYRSVQQPLRYLRYRTKTRASATILAAWFLSFLWVIPILGWHRFMSKTSGHREDKCETDFYNVTWFKVMTAIINFYLPTLLMLWFYARIYKAVRQHCQHRELISGSLPSFSEDKLKPEDLSVGAKKPGKQSPWEVLKRKPKDAGGGPVLKPASQDPKEIKSPGVFSQEKDGELDKFHCSPLNIVQTQMEADGSGREHVAINQSQSQLEMGXQGLNMHGAKEVLEDQILGDSQSFSRTDSDTPPELAPGKAKSKSESSTGLDYIKFTWKRLCSHSRQYVSGLHMNRERKAAKQLGFIMVAFIVCWIPYFIFFMVIAFCESCYNQHVXMFTIWLGYINSTLNPLIYPLCNENFKKTFKKILHIRS*