Sequence details bmy_00439 (Coding sequence)

Part of scaffold_6 (Scaffold)

For more information consult the page for scaffold_6 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PRRT3 ENSTTRG00000007552 (Bottlenosed dolphin)

Gene Details

proline-rich transmembrane protein 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007144, Bottlenosed dolphin)

Protein Percentage 95.91%
cDNA percentage 97.54%
Ka/Ks Ratio 0.78457 (Ka = 0.0176, Ks = 0.0224)

PRRT3 ENSBTAG00000010836 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014379, Cow)

Protein Percentage 88.33%
cDNA percentage 90.69%
Ka/Ks Ratio 0.32143 (Ka = 0.0648, Ks = 0.2017)

PRRT3  (Minke Whale)

Gene Details

proline-rich transmembrane protein 3

External Links

Gene match (Identifier: BACU015165, Minke Whale)

Protein Percentage 72.06%
cDNA percentage 72.88%
Ka/Ks Ratio 0.90684 (Ka = 0.0132, Ks = 0.0146)

Additional orthologs identified in other species via the OPTIC pipeline.

PRRT3 (Human)   Prrt3 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 2934 bp    Location:2900051..2906497   Strand:+
Raw sequence 
>bmy_00439
ATGGCTCCCAGCCCCTGGGGCTGTGTGTATGGCCGCCTGCTGCTGTTGCTGCTGCTGTCCCTGGGGGCTGGCTCTGCCCTGGGCCGGGGCCTTCCCAGGCCACTTGAGGACTTGGAACCACACTTGATCCCAGGAGCCCACCCCAAGGGCCCTGTTGGCACAGAGCCCCAGGCCTTTGACTTCTTCTGGGAGAAGCCCAGAGACAAGAGCCCCTGGAACTCCAATGTCCCCCAGGTCCCTGCTGAGGAGATGCCTGAGAGGCCCACAGACTCCCTTGGCCCAGCCCTGCATGGACCTAAAGCAGCCCATGGGGCGCAGAGAGAAGGACTCCCAGTAACTGATGACCTCCAGGTGGCTCGAGGGCCAATTTTTCAGGGCTGGACAGGACCTCCTGAATCACAGGAGTCTACGGAGCAAGAAGCACCAGCCCCCTATCCAGTGGGCRCCCCCCATCTCACTTTCATCCCCACAACTCCCAGACTCCAACTCGGGCTAGCCACGGTTCCTCCCATCCCAGGGCAGCCTGGAAGCCAAGTGGGACAGCGACCACCTAGAGATGAGGGTCTTGTGGCCAAAGCCAAGATCGGAGTCTCAGAGACATCCCCCTGGGACCACAAGGGCCCTCCCCACACTCTTGTGCCACACCCAGGCACTATCATGAGGCCAGGGCTGAAAGAACAGGGTGGGAGTGAGGAGGACTTCCAGGAGGCAGCTCAAGGCCCCCTCTCCACCCAGCAGGATCCAGCAGCTCCTGATGTTGGCTCAGTATCACCAGCTGAGGCGGCATCCTCTCAGGAGCCTAGGTCCCAGCCAGACCTGGCATTGGCCAGAAGCCTTCCTCCTGCTGAGGAGCTGCCCATGGAGCTCCCCAAGAAGGCTGGAGGTGGGGAGACCTGGGAAGTCAGTATTCCAAGTCCCTCACCCAAACAGACTGACCTCCCTGATGTTAGGGGCTCATCAGGACCCCAGCCCTCAGGTCCCCCAGCCTCAGAGACTCCTAATGGGCAGCCCAAGCCAGAGATAGCAGCAATGAATGGAGCAGACCCCATCTCCCCCCAGCGGGTGAGAGGAGCAGTGGAGGCCTCAGGTACCCCCAAGTCCCTCATCCCTGGCCCTTTGGACCCTGGCCCAACTACAAACGGAACAGAGAGCCCTGTGGGAGCCCTGCAGCCAGATGAAGCCGAGGAGTGGCCGGGGCGTCCCCAAAGCCATCCCCCAGCGCCCCCTGTCCAGGCCCCCTCGACGTCACGCCGGGGCCTCATTCGGGTCACCACGCAGCGTGCCCTGGGCCAGCCACCCCCTCCGGAGCCCTCCGCCAGCTCCGTGGCATCAGTCCCAGCCTCCAGCCCCCCGGCCAACGCCACCTCACCCCCCCTGCGCTGGGGTCCCCTGCGGCGGGTGCTGAGCTTTTCCTGGGAGCTGCACGTCTACGGGGTCGGGGTGCTCTTCCTGCTGCCTGCGTTGTTGGCACTGGCCTCGCTGGCAGCCGCCCCTGCGGGGCCCCGGTTGGCACTGGTGGCGGCGGTGCTGGTGCTGGTGGCGTCGGGGCTGCGGTCCGCCTACATGCTCACCGACCCCTATGGCTCGCAGGCACGACTGGGTTTACGCGCCGGCCTGGTGCTCTACAATCTGCCCTTTCCCTTGCTACTCACCGCGCTGGCGGCCCTGACCCTGCTCGGCCTGGGCGCGGGGCTGCCACAGCAGCTGCAGAACCCGCTCCTCCTGGGAGCGCTGGCGTTGGCGCACGGCTTGGGGCTGCTCGCCACAGACCTGCTGTCGGCGAAGCCTGCGCTCAACCTCCTGGCTCAGGGCTTATCGTGCGCCTGGGGCGCGTCCGTGGCTCTGGGCACGCTCTGCCTGTGCCGTCGCCGCCTGCTGGACGGGCCGAGGGGCTGGGATGCCAGCCCGGGCCCCAGGCTGCTGGCCGTGGCGGGCGCGCTGGGGCTGCTGGCCAGTGGCTTGCAGCTGGCGGCCGCGCTCTGGCTGTACCCGGGCCCCGGCCGGGTGGGCCACTTCTCGTGGGCCTGGTGGGGCGTCCACTTCTGGCTGCGCCTGCTGGAGCTGACGTGGGCGCTCACCCTGGCGCTGGCCGCTCTGGCCGCCGCGCGGCCCAGGCCGCCCACAGAGCACGCCTGCTGGGCTAAGCTGCTGCGCCTGGCGTGCCCTACGCCCTCCGGCAAGAGCGAGGTGCCCGAGAGGCCCAACAACTGCTACGCGGGGCCCAGCAGCGTCGGCGCAGGTACCCTGGACATTAGCAAGAGCCTCATGCGCAACCCGGCGGAGGGTGGGCCTCCAGCCACGCCCAGTTCAGGCGCCTGGGGTTCGGCTGCGTCGCTGGGCCGCGGTCCCCTGGGTGGCCCGGGACTGTCCCGCAGCAGCATGGGGCCGGCGCCATCGATGAGCGAGCTGGACCTGCGGCCGCCATCACCCATCAACCTGAGCCGCAGCATCGACGCCGCGCTCTTCCGAGAGCACTTGGTGCGAGACAGCATCTTCCGGCGCTGCGGCCTCCGTGGCCTGGCCTCCCCGCCGCCCGGGGGCGCGCTGCGGCCGCGCCGGGGCAGCCACCCCGACGCCGAGCTAGATGGCGCAGGTTCTTCGCTCCTCCGCGGCCGCAGCCGGTCGCTCAGCGACGTGCGCGTGCGCGGCCCGGTCCCACCACATGTAGTGGACGAGCCTGTCGGGGCGGCTTCCGGCAGCTCCGTGGACAGCTTCTCACGGGCCTCGCTCAAGATCAGCTGGAACCCCTGGCGCCACGGGCTGTCGTCGATGGACAGTCTGCCCCTGGATGAGCTGCCCAGCACGGTGCAGCTACTGTCTGCCCCAGCTCCTGCCCCGGGTCCCGCCCGGCCCGGGGAGCCCCAGAATGGGATCCAGCCTCGCTGCAAGCCCGGGGACTCCCGCAGCGCCTCCAGTGACACCATCGAGCTCTGA

Related Sequences

bmy_00439T0 Protein

Length: 978 aa      View alignments
>bmy_00439T0
MAPSPWGCVYGRLLLLLLLSLGAGSALGRGLPRPLEDLEPHLIPGAHPKGPVGTEPQAFDFFWEKPRDKSPWNSNVPQVPAEEMPERPTDSLGPALHGPKAAHGAQREGLPVTDDLQVARGPIFQGWTGPPESQESTEQEAPAPYPVGXPHLTFIPTTPRLQLGLATVPPIPGQPGSQVGQRPPRDEGLVAKAKIGVSETSPWDHKGPPHTLVPHPGTIMRPGLKEQGGSEEDFQEAAQGPLSTQQDPAAPDVGSVSPAEAASSQEPRSQPDLALARSLPPAEELPMELPKKAGGGETWEVSIPSPSPKQTDLPDVRGSSGPQPSGPPASETPNGQPKPEIAAMNGADPISPQRVRGAVEASGTPKSLIPGPLDPGPTTNGTESPVGALQPDEAEEWPGRPQSHPPAPPVQAPSTSRRGLIRVTTQRALGQPPPPEPSASSVASVPASSPPANATSPPLRWGPLRRVLSFSWELHVYGVGVLFLLPALLALASLAAAPAGPRLALVAAVLVLVASGLRSAYMLTDPYGSQARLGLRAGLVLYNLPFPLLLTALAALTLLGLGAGLPQQLQNPLLLGALALAHGLGLLATDLLSAKPALNLLAQGLSCAWGASVALGTLCLCRRRLLDGPRGWDASPGPRLLAVAGALGLLASGLQLAAALWLYPGPGRVGHFSWAWWGVHFWLRLLELTWALTLALAALAAARPRPPTEHACWAKLLRLACPTPSGKSEVPERPNNCYAGPSSVGAGTLDISKSLMRNPAEGGPPATPSSGAWGSAASLGRGPLGGPGLSRSSMGPAPSMSELDLRPPSPINLSRSIDAALFREHLVRDSIFRRCGLRGLASPPPGGALRPRRGSHPDAELDGAGSSLLRGRSRSLSDVRVRGPVPPHVVDEPVGAASGSSVDSFSRASLKISWNPWRHGLSSMDSLPLDELPSTVQLLSAPAPAPGPARPGEPQNGIQPRCKPGDSRSASSDTIEL*