Sequence detailsbmy_00442 (Coding sequence)

Part of scaffold_6 (SequenceType object (1))

For more information consult the page for scaffold_6 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

JAGN1ENSTTRG00000007546 (Bottlenosed dolphin)

Gene Details

jagunal homolog 1 (Drosophila)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007139, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 99.36%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0282)

JAGN1ENSBTAG00000010832 (Cow)

Gene Details

Protein jagunal homolog 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000030786, Cow)

Protein Percentage 98.09%
cDNA percentage 95.33%
Ka/Ks Ratio 0.03919 (Ka = 0.0085, Ks = 0.2166)

JAGN1 (Minke Whale)

Gene Details

jagunal homolog 1 (Drosophila)

External Links

Gene match (Identifier: BACU015163, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 98.94%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.048)

Additional orthologs identified in other species via the OPTIC pipeline.

JAGN1 (Human)   Jagn1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 474 bp    Location:2949984..2947547   Strand:-
Raw sequence 
>bmy_00442
ATGGCGTCTCGGGCAGGCCCGCGAGCGGCTGGCACCGACGGCAGCGACTTTCAGCACCGGGAACGCGTCGCCACGCACTACCAGATGAGCGTGGGGCACCTGAGGCTCTTGTCGCATGATCAGGTGGCCATGCCCTATCAGTGGGAGTACCCCTATTTGCTGAGCATTGTGCCCTCCCTCTTGGGCCTCCTCTCCTTCCCCCGCAACAACATTAGCTACCTGGTGCTCTCCATGATCAGCATGGGGCTCTTTTCCATCGCTCCCCTCATATATGGCAGCATGGAGATGTTCCCTGCTGCACAGCAGCTCTACCGCCATGGCAAGGCCTACCGCTTCCTCTTTGGTTTTTCTGCCGTCTCCGTCATGTATCTGGTGTTGGTGCTGGTGGTCCAAGTGCATGCCTGGCAGTTATACTACAGCAAGAAGCTCCTAGACTCTTGGTTCACCAGCACACAGGAGAAGAAGCGTAAATGA

Related Sequences

bmy_00442T0 SequenceType object (3)

Length: 158 aa      View alignments
>bmy_00442T0
MASRAGPRAAGTDGSDFQHRERVATHYQMSVGHLRLLSHDQVAMPYQWEYPYLLSIVPSLLGLLSFPRNNISYLVLSMISMGLFSIAPLIYGSMEMFPAAQQLYRHGKAYRFLFGFSAVSVMYLVLVLVVQVHAWQLYYSKKLLDSWFTSTQEKKRK*