Part of scaffold_6 (Scaffold)

For more information consult the page for scaffold_6 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BRPF1 ENSTTRG00000009771 (Bottlenosed dolphin)

Gene Details

bromodomain and PHD finger containing, 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009263, Bottlenosed dolphin)

Protein Percentage 99.42%
cDNA percentage 98.34%
Ka/Ks Ratio 0.03843 (Ka = 0.0026, Ks = 0.0669)

BRPF1 ENSBTAG00000007776 (Cow)

Gene Details

peregrin

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010224, Cow)

Protein Percentage 98.92%
cDNA percentage 95.52%
Ka/Ks Ratio 0.0215 (Ka = 0.0047, Ks = 0.2189)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3720 bp    Location:3082764..3069282   Strand:-
>bmy_00450
ATGGGGGTGGACTTTGACGTGAAGACTTTCTGCCACAACTTGCGGGCAACTAAGCCACCGTATGAGTGCCCCGTGGAGACCTGCCGCAAGGTCTACAAGAGTTACAGTGGTATTGAGTACCACCTGTACCACTATGACCATGACAACCCACCGCCCCCACAGCAGACTCCACTCCGAAAGCACAAGAAGAAGGGGCGCCAGTCACGCCCAGCCAACAAGCAGTCGCCCACCCCCTCAGAGGTATCCCAGTCGCCCAGCCGTGAGGTGATGAGTTACGCACAGGCCCAGCGCATGGTGGAGGTGGACCTGCACGGCCGCGTCCACCGCATCAGCATCTTTGACAACCTGGATGTGGTGTCAGAAGATGAGGAGGCCCCTGAGGAGGCCCCTGAGAACGGCAGCAATAAGGAGAACACTGAGACACCGGCTGCTACCCCCAAGTCAGGCAAGCATAAGAACAAGGAGAAGCGCAAGGACTCCAACCACCACCATCACCACAGCGCTTCTGCAAGCACCACCCCCAAGCTGCCGGAGGTGGTGTACCGGGAGCTGGAGCAGGACACCCCTGACGCCCCGCCCCGGCCGACTTCCTATTACCGGTACATCGAGAAGTCGGCAGAAGAGCTGGATGAGGAAGTAGAGTATGACATGGATGAGGAGGACTACATCTGGCTGGATATCATGAACGAGCGGCGGAAGACGGAGGGTGTGAGTCCCATTCCGCAGGAAATCTTTGAGTACTTAATGGACCGGCTGGAGAAAGAGTCCTACTTTGAGAGCCACAATAAAGGCGACCCCAATGCGCTAGTGGATGAGGATGCTGTGTGCTGTATCTGCAATGATGGTGAGTGCCAGAACAGCAATGTCATCCTCTTCTGTGACATGTGCAACCTGGCTGTGCACCAGGAGTGCTACGGTGTCCCCTACATCCCTGAGGGCCAGTGGCTGTGCCGCCGCTGCCTACAGTCACCCTCCCGTGCTGTGGACTGCGCCCTGTGCCCCAACAAGGGTGGTGCCTTCAAGCAGACAGATGATGGGCGCTGGGCCCATGTGGTGTGTGCCCTATGGATCCCTGAGGTCTGCTTTGCCAACACGGTCTTCCTGGAGCCTATCGACAGCATCGAGCACATCCCGCCAGCTCGCTGGAAGCTGACCTGCTACATTTGCAAACAGCGGGGCTCAGGGGCCTGCATCCAGTGCCACAAGGCCAACTGCTACACAGCCTTCCATGTGACATGTGCCCAGCAGGCCGGCCTTTACATGAAGATGGAGCCTGTGCGGGAGACGGGTGCCAATGGCACCTCCTTCAGCGTCCGCAAGACTGCCTACTGCGACATCCATACACCTCCAGGTTCAGCACGCCGCCTGCCTGCCCTATCCCACAGCGAGGGTGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGGTAAGAGTTGGAGCTCAGAGAAGGTCAAGAAGGCCAAGGCCAAGTCCCGGATCAAGATGAAGAAGGCGCGGAAGATCTTGGCAGAGAAACGGGCAGCAGCACCTGTGGTGTCTGTGCCCTGCATCCCACCACACAGGCTCAGTAAAATCACTAACCGCCTGACCATCCAAAGGAAGAGCCAGTTCATGCAGAGGCTGCACAGCTACTGGACGCTAAAGAGGCAGTCACGGAATGGGGTCCCACTGCTGCGTCGCCTGCAGACACACCTGCAGTCTCAGAGGAACTGTGACCAAGTTGGGAGAGATTCTGAAGACAAGAACTGGGCCCTCAAAGAACAGCTCAAGTCCTGGCAGCGGCTTCGGCATGACCTGGAGCGAGCCCGGCTGCTGATCAAGGTCCAGCAGATTGCCATGGAGATGCAGCTGACCCCTTTCCTCATCCTCCTTCGAAAAACCCTGGAGCAGCTCCAAGAGAAGGACACAGGCAACATCTTCAGCGAGCCGGTCCCTCTGTCTGAGGTAACCGAATTGGACGAAGTACCTGACTACCTAGACCACATCAAAAAGCCTATGGACTTTTTCACCATGAAGCAGAACTTGGAGGCTTACCGCTACCTGAACTTTGATGATTTTGAGGAGGACTTCAACCTTATCGTCAGCAACTGCCTCAAGTACAATGCCAAGGATACCATCTTCTACCGGGCAGCAGTGCGGCTCCGTGAGCAGGGTGGTGCTGTGCTCCGCCAGGCCCGGCGCCAGGCAGAAAAAATGGGCATTGACTTTGAGACGGGCATGCATATCCCCCACAGCCTGGCTGGAGACGAGGCCTCACACCACACCGAAGATGCAGAGGAAGAGCGGCTGGTCCTGCTGGAGAACCAGAAGCACTTGCCAGTGGAAGAGCAGCTGAAGCTGTTGCTCGAGCGGCTGGATGAGGTGAATGCCAGTAAGCAGAGCGTGGGCCGCTCACGCCGTGCAAAGATGATCAAGAAAGAGATGACGGCGCTGCGGCGCAAGCTTGCCAACCAGCGGGAAACTGGACGAGATGGGCCTGAGCGGCATGGCCCCTCCAGCCGGGGCAGCCTGACACCCCACCCGGCAGCCTGTGACAAGGACGGGCAGACAGACAGTGCCGCCGAGGAGAGCAGCAGCCAGGAGACAAGCAAAGGCCTGGGTCCCAACATGTCCTCAACCCCCGCACATGAGGTGGGCAGGAGAACCTCAGTTCTGTTCTCCAAAAAGAACCCGAAGACAGCTGGACCGCCCAAGAGGCCGGGCCGGCCCCCAAAAAACCGGGAGAGCCAGATGACCCCCAGCCACGGAGGCAGTCCTGTGGGGCCCCCCCAGCTCCCCATCATGGGCTCCCTACGTCAGCGCAAGCGGGGTAGGAGCCCTCGGCCCAGTTCGAGTTCAGACAGCGACAGTGATAAATCCACAGAAGACCCCCCAATGGACTTACCAGCCAACGGCTTCAGCGGTGGAAACCAGCCAGTAAAGAAGAGTTTCTTGGTATATCGTAATGACTGCAGCCTTCCTCGGAGCAGCTCAGACTCTGAGTCCAGCAGCAGTAGCAGCAGCAGTGCTGCCTCAGACCGGACCAGCACAACGCCTTCAAAACAAGGCCGGGGCAAGCCCTCCTTCTCTCGGGGCACGTTCCCAGAGGACAGCAGTGAAGATACCTCAGGCACTGAGAACGAGGCCTACTCCGTGGGCACTGGCCGCGGCGTGGGCCACAGCAGTAAGTACGCCCGCCCAAAGCCAGGGGTTCTGGGGGCCCAGTGCCAGGGCCTTGCCAGACCCCGGACTGCTGATCCGCCCCCTCTCTCCCATTCCTGTGAAGTGGTAAGGAAGAGTCTGGGCCGGGGAGCTGGCTGGCTGTCAGAGGATGAGGACTCCCCGCTGGATGCTCTGGACCTGGTGTGGGCCAAATGCCGAGGGTATCCATCATACCCAGCTCTGATCATTGATCCAAAGATGCCCCGGGAAGGTATGTTCCACCATGGGGTTCCCATCCCTGTGCCCCCACTGGAGGTGCTGAAACTTGGGGAACAGATGACCCAGGAAGCCCGAGAGCATCTCTACCTCGTCCTCTTCTTTGACAACAAGCGAACCTGGCAGTGGCTGCCCAGGACTAAGCTGGTTCCTCTGGGCGTGAACCAGGACCTTGACAAGGAGAAGATGCTGGAGGGCCGGAAATCCAACATCCGCAAGTCAGTACAGATCGCCTACCACAGGGCTCTGCAGCACCGCAGCAAGGTGCAGGGCGAGCAGAGCAGTGAGACCAGCGATAGTGACTGA

Related Sequences

bmy_00450T0 Protein

Length: 1240 aa      View alignments
>bmy_00450T0
MGVDFDVKTFCHNLRATKPPYECPVETCRKVYKSYSGIEYHLYHYDHDNPPPPQQTPLRKHKKKGRQSRPANKQSPTPSEVSQSPSREVMSYAQAQRMVEVDLHGRVHRISIFDNLDVVSEDEEAPEEAPENGSNKENTETPAATPKSGKHKNKEKRKDSNHHHHHSASASTTPKLPEVVYRELEQDTPDAPPRPTSYYRYIEKSAEELDEEVEYDMDEEDYIWLDIMNERRKTEGVSPIPQEIFEYLMDRLEKESYFESHNKGDPNALVDEDAVCCICNDGECQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRRCLQSPSRAVDCALCPNKGGAFKQTDDGRWAHVVCALWIPEVCFANTVFLEPIDSIEHIPPARWKLTCYICKQRGSGACIQCHKANCYTAFHVTCAQQAGLYMKMEPVRETGANGTSFSVRKTAYCDIHTPPGSARRLPALSHSEGEEEEEEEEEEGKSWSSEKVKKAKAKSRIKMKKARKILAEKRAAAPVVSVPCIPPHRLSKITNRLTIQRKSQFMQRLHSYWTLKRQSRNGVPLLRRLQTHLQSQRNCDQVGRDSEDKNWALKEQLKSWQRLRHDLERARLLIKVQQIAMEMQLTPFLILLRKTLEQLQEKDTGNIFSEPVPLSEVTELDEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVRLREQGGAVLRQARRQAEKMGIDFETGMHIPHSLAGDEASHHTEDAEEERLVLLENQKHLPVEEQLKLLLERLDEVNASKQSVGRSRRAKMIKKEMTALRRKLANQRETGRDGPERHGPSSRGSLTPHPAACDKDGQTDSAAEESSSQETSKGLGPNMSSTPAHEVGRRTSVLFSKKNPKTAGPPKRPGRPPKNRESQMTPSHGGSPVGPPQLPIMGSLRQRKRGRSPRPSSSSDSDSDKSTEDPPMDLPANGFSGGNQPVKKSFLVYRNDCSLPRSSSDSESSSSSSSSAASDRTSTTPSKQGRGKPSFSRGTFPEDSSEDTSGTENEAYSVGTGRGVGHSSKYARPKPGVLGAQCQGLARPRTADPPPLSHSCEVVRKSLGRGAGWLSEDEDSPLDALDLVWAKCRGYPSYPALIIDPKMPREGMFHHGVPIPVPPLEVLKLGEQMTQEAREHLYLVLFFDNKRTWQWLPRTKLVPLGVNQDLDKEKMLEGRKSNIRKSVQIAYHRALQHRSKVQGEQSSETSDSD*