Sequence detailsbmy_00463 (Coding sequence)

Part of scaffold_6 (SequenceType object (1))

For more information consult the page for scaffold_6 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CAV3ENSTTRG00000006037 (Bottlenosed dolphin)

Gene Details

caveolin 3

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005705, Bottlenosed dolphin)

Protein Percentage 72.34%
cDNA percentage 76.36%
Ka/Ks Ratio 0.24742 (Ka = 0.232, Ks = 0.9376)

CAV3ENSBTAG00000022699 (Cow)

Gene Details

Caveolin-3

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000030761, Cow)

Protein Percentage 69.5%
cDNA percentage 76.6%
Ka/Ks Ratio 0.02363 (Ka = 0.2178, Ks = 9.2163)

CAV3 (Minke Whale)

Gene Details

caveolin 3

External Links

Gene match (Identifier: BACU015150, Minke Whale)

Protein Percentage 80.87%
cDNA percentage 86.38%
Ka/Ks Ratio 0.41063 (Ka = 0.1351, Ks = 0.329)

Additional orthologs identified in other species via the OPTIC pipeline.

CAV3 (Human)   Cav3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 426 bp    Location:3890000..3888117   Strand:-
Raw sequence 
>bmy_00463
ATGCGTGAGCAGGATTCTCTGAATGCCCACGTTCCTCGCAGCTGCAAAGGAGGGAAGGGGTGGGCAGCGGCAGAGGAGAGTCTGAGGTCGCTGCAGGACCAGCGTGGGGAGAGCAAAGCCTGTGTCCTCCACGGGTGCTGCGCTCAGGTGAGCTACACCACCTTCACCGTCTCCAAGTACTGGTGCTACCGCCTGCTGTCCACGCTGCTGGGGGTCCCGCTGGCCCTGCTCTGGGGCTTCCTGTTCGCCTGCATCTCCTTCTGCCACATCTGGGCGGTGGTGCCCTGCATCAAGAGCTACCTGATCGAGATCCAGTGCATCAGCCACATCTACTCCCTCTGCGTCCGCACCTTCTGCAACCCGCTCTTCGCTGCCCTGGGCCAGGTCTGCAGCAACATCAAGGTGATGCTGCGGAAAGAAGTGTGA

Related Sequences

bmy_00463T0 SequenceType object (3)

Length: 142 aa      View alignments
>bmy_00463T0
MREQDSLNAHVPRSCKGGKGWAAAEESLRSLQDQRGESKACVLHGCCAQVSYTTFTVSKYWCYRLLSTLLGVPLALLWGFLFACISFCHIWAVVPCIKSYLIEIQCISHIYSLCVRTFCNPLFAALGQVCSNIKVMLRKEV*