Sequence details bmy_00482 (Coding sequence)

Part of scaffold_7 (Scaffold)

For more information consult the page for scaffold_7 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ATP6V1C1 ENSTTRG00000013194 (Bottlenosed dolphin)

Gene Details

ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012519, Bottlenosed dolphin)

Protein Percentage 98.03%
cDNA percentage 97.85%
Ka/Ks Ratio 0.23708 (Ka = 0.0113, Ks = 0.0475)

ATP6V1C1 ENSBTAG00000013513 (Cow)

Gene Details

V-type proton ATPase subunit C 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017968, Cow)

Protein Percentage 98.04%
cDNA percentage 95.44%
Ka/Ks Ratio 0.0719 (Ka = 0.0108, Ks = 0.1501)

ATP6V1C1  (Minke Whale)

Gene Details

ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1

External Links

Gene match (Identifier: BACU004816, Minke Whale)

Protein Percentage 90.78%
cDNA percentage 92.18%
Ka/Ks Ratio 0.78924 (Ka = 0.079, Ks = 0.1001)

Additional orthologs identified in other species via the OPTIC pipeline.

ATP6V1C1 (Human)   Atp6v1c1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1077 bp    Location:1699281..1726355   Strand:+
Raw sequence 
>bmy_00482
ATGACTGAGTTCTGGCTTATATCAGCTCYTGGGGAGAAAACATGTCAGCAAACATGGGAGAAATTGCATGCGGCAACTACGAAGAACAACAATCTTGCAGTTACTTCAAAGTTCAACATTCCTGACTTAAAGGTTGGCACACTGGACATCTTGGTTGGTTTGTCGGATGAACTGGCTAAACTGGATGCATTTGTAGAAGGGGTGGTTAAGAAAGTGGCTCAGTATATGGCTGACGTACTGGAGGATAGTAAAGATAAAGTTCAGGAGAATCTGTTGGCCAACGGAGTTGACTTGGTTACTTATATAACAAGGTTTCAATGGGACATGGCTAAATATCCAATCAAGCAGTCCCTGAAAAATATTTCTGAAATAATTGCCAAGGATAATCCCTCTCTTGAGATAGGAAGTTTGCTAACTAGAAGTCTAGCAGAAATTGTGAAGAAGGATGACTTTGTGCTTGACTCAGAGTATCTCGTCACATTACTGGTCGTGGTTCCCAAGTTAAACCACAATGACTGGATTAAGCAGTATGAAACACTAGCTGAAATGGTGGTTCCAAGGTCTAGCAATGTTCTCTCAGAGGACCAAGACAGTTACCTGTGTAATGTCACCTTGTTTAGGAAGGCAGTTGATGACTTCAGACACAAAGCCAGGGAAAACAAATTCATCGTTCGTGACTTCCAGTATAATGAAGAGGAGATGAAAGCAGACAAAGAAGAAATGAACAGGCTTTCTACCGACAAGAAAAAGCAATTTGGACCACTTGTACGGTGGCTGAAAGTGAATTTCAGTGAGGCGTTTATTGCGTGGATTCATGTAAAAGCGTTGAGGGTTTTTGTTGAGTCTGTTTTGAGGTATGGCTTGCCAGTGAACTTCCAAGCAATGCTCCTTCAGCCCAGTAAGAAAACAATGAAGAAACTAAGAGAAGTATTATATGAATTGTATAAACATCTAGATAGCAGTGCAGCAGCTATTATTGATGCTCCTATGGATATTCCAGGCTTAAACCTGAGTCAACAGGAATATTACCCCTATGTGTACTACAAGATCGATTGCAACTTGCTGGAATTCAAGTAA

Related Sequences

bmy_00482T0 Protein

Length: 359 aa      View alignments
>bmy_00482T0
MTEFWLISAXGEKTCQQTWEKLHAATTKNNNLAVTSKFNIPDLKVGTLDILVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKDNPSLEIGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKARENKFIVRDFQYNEEEMKADKEEMNRLSTDKKKQFGPLVRWLKVNFSEAFIAWIHVKALRVFVESVLRYGLPVNFQAMLLQPSKKTMKKLREVLYELYKHLDSSAAAIIDAPMDIPGLNLSQQEYYPYVYYKIDCNLLEFK*