Part of scaffold_7 (Scaffold)

For more information consult the page for scaffold_7 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CTHRC1 ENSTTRG00000015794 (Bottlenosed dolphin)

Gene Details

collagen triple helix repeat containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014961, Bottlenosed dolphin)

Protein Percentage 96.95%
cDNA percentage 98.31%
Ka/Ks Ratio 0.62502 (Ka = 0.0147, Ks = 0.0235)

CTHRC1 ENSBTAG00000032591 (Cow)

Gene Details

collagen triple helix repeat-containing protein 1 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013555, Cow)

Protein Percentage 98.35%
cDNA percentage 95.06%
Ka/Ks Ratio 0.04994 (Ka = 0.0081, Ks = 0.1631)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 735 bp    Location:1980483..1992313   Strand:+
>bmy_00484
ATGCGCCTCCAGGGCCCCGCCACCGCCTCCCCGCAGCGGCTCCTCGGCCTCCTGCTGCTCCTGCTGCTGCAGCTGCGGGCGCCGTCGAGCGCCTCCGAGACCCCCAAGGGGAAGCAAAAGGCTCTGCTCCGGCAGAGGGAGGTGGTGGACCTGTATAATGGCATGTGCTTACAAGGGCCCGCGGGGGTGCCTGGGCGAGATGGGAGCCCTGGGGCCAATGGCATCCCTGGTACCCCTGGGATCCCAGGTCGAGATGGATTCAAAGGAGAAAAGGGGGAATGCCTGAGGGAAGTCTTTGAGGAGTCCTGGACGCCTAACTATAAGCAGTGTTCGTGGAGTTCACTGAATTATGGCATAGACCTTGGAAAAATTGCGGAGTGTACATTCACAAAGATGCGTTCGAACAGCGCCCTAAGAGTTTTGTTCAGTGGCTCGCTTCGGTTAAAATGCAGAAGCGCATGCTGTCAGCGTTGGTATTTCACGTTCAATGGAGCTGAATGTTCAGGACCTCTTCCTATTGAAGCCATAATTTATTTGGACCAAGGAAGCCCTGAACTGAATTCGACAATTAATATTCATCGCACTTCTTCTGTGGAAGGACTCTGTGAAGGAATTGGTGCCGGACTAGTTGACATTGCTATCTGGGTTGGAACTTGCTCAGATTACCCGAAAGGAGATGCCTCTACGGGGTGGAATTCAGTGTCTCGTATCATTATTGAAGAGCTACCAAAATAA

Related Sequences

bmy_00484T0 Protein

Length: 245 aa      View alignments
>bmy_00484T0
MRLQGPATASPQRLLGLLLLLLLQLRAPSSASETPKGKQKALLRQREVVDLYNGMCLQGPAGVPGRDGSPGANGIPGTPGIPGRDGFKGEKGECLREVFEESWTPNYKQCSWSSLNYGIDLGKIAECTFTKMRSNSALRVLFSGSLRLKCRSACCQRWYFTFNGAECSGPLPIEAIIYLDQGSPELNSTINIHRTSSVEGLCEGIGAGLVDIAIWVGTCSDYPKGDASTGWNSVSRIIIEELPK*