Sequence details bmy_00510 (Coding sequence)

Part of scaffold_9 (Scaffold)

For more information consult the page for scaffold_9 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DEFB123 ENSTTRG00000005795 (Bottlenosed dolphin)

Gene Details

defensin, beta 123

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005457, Bottlenosed dolphin)

Protein Percentage 83.58%
cDNA percentage 93.53%
Ka/Ks Ratio 1.95881 (Ka = 0.0795, Ks = 0.0406)

BT.54136 ENSBTAG00000020555 (Cow)

Gene Details

beta-defensin 123 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027390, Cow)

Protein Percentage 75.0%
cDNA percentage 87.5%
Ka/Ks Ratio 1.30197 (Ka = 0.1515, Ks = 0.1164)

Additional orthologs identified in other species via the OPTIC pipeline.

DEFB123 (Human)   Defb36 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 360 bp    Location:87097..105110   Strand:+
Raw sequence 
>bmy_00510
ATGAAGCTCCTTTTGCTGACTCTGGCCGCACTGCTGCTCTTGTTCCAGCTCACTCCAGTTCATTGTGGAATTCGGGACATATATATAAAGCCCAAGAGCCCAGCAGAGAATAGTCACAGCACCAAACTGCCTAAAGAAAGTAGTTTCACTGACACAAATAGAGGTTACAGACTTTATTCAGCTGATGGACATCAGGGAGCAGCTGAAGACCCAAGTAGCGCCCTAAAATGCTGGAATCTTCATGGCAAATGCCGCCAGAACTGTTTCAAGAAGGAAAGGGTCTATATTTACTGCACAAATAATAAAATGTGCTGTGTGAAGCCCAAGTACCAGCCAAAAAACCTTCCATGGAAAGTTTAA

Related Sequences

bmy_00510T0 Protein

Length: 120 aa      View alignments
>bmy_00510T0
MKLLLLTLAALLLLFQLTPVHCGIRDIYIKPKSPAENSHSTKLPKESSFTDTNRGYRLYSADGHQGAAEDPSSALKCWNLHGKCRQNCFKKERVYIYCTNNKMCCVKPKYQPKNLPWKV*