Part of scaffold_9 (Scaffold)

For more information consult the page for scaffold_9 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

E2F1 ENSTTRG00000010099 (Bottlenosed dolphin)

Gene Details

E2F transcription factor 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009580, Bottlenosed dolphin)

Protein Percentage 87.21%
cDNA percentage 87.89%
Ka/Ks Ratio 0.28198 (Ka = 0.0192, Ks = 0.0681)

BT.78028 ENSBTAG00000003971 (Cow)

Gene Details

transcription factor E2F1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000005182, Cow)

Protein Percentage 94.19%
cDNA percentage 91.76%
Ka/Ks Ratio 0.08096 (Ka = 0.0271, Ks = 0.3343)

E2F1  (Minke Whale)

Gene Details

E2F transcription factor 1

External Links

Gene match (Identifier: BACU015557, Minke Whale)

Protein Percentage 95.1%
cDNA percentage 96.57%
Ka/Ks Ratio 0.70734 (Ka = 0.0327, Ks = 0.0462)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1038 bp    Location:1961415..1957330   Strand:-
>bmy_00557
TTGGAAACTGACCATCAGTACCTGGCCGAGAGCAGTGGGCCAGCTCGGGGCAGAGGCCGCCACCCAGGAAAAGGTGTGAAATCCCCAGGGGAGAAGTCACGCTATGAAACATCGCTGAATCTGACTACCAAGCGCTTCCTGGAGTTGCTGAGCCGCTCGGCCGATGGTGTCGTCGACCTGAACTGGGCAGCTGAGGTGCTGAAGGTGCAGAAACGGCGCATCTACGACATCACCAACGTCCTCGAGGGCATCCAGCTCATCGCCAAGAAGTCCAAGAACCACATCCAGTGGCTAGGCAGCCATGCAGCAGTGGGGATCGGTGGGCGGCTCGAAGGATTGACCCAGGACCTCCAGCAACTGCAGGAAAGCGAGCGGCAGCTGGACCACCTGATCCACATCTGCACCACGCAGCTGCGTCTGCTTTCCGAGGATGCTGACAGCCAGCGCCTGGCCTACGTGACCTGCCAGGACCTTCGTAGCATTGCGGACCCTGCAGAACAGATGGTTATGGTGATCAAGGCCCCTCCCGAGACCCAGCTTCAAGCTGTGGACTCCTCAGAGACCTTTCAGATCTCCCTTAAGAGCAAACAAGGCCCCATCGATGTTTTCCTGTGCCCTGAGGAGAGTGCGGGCGGGATCAGCCCCGGGAAGACCTCGTCCCAGGGTGCAGCTTCTGGGGAGGAGGACAGGGCAGCTGACCCTGCCACCACAGTGCCACCACCACCATCATCATCTCCCCCCTCATCCCCTGCCACGGATCCCAGTCAGTCCCTGCTAAGCCTGGAGCAAGAACCTCTGCTTTCCCGGATGGGCAGCCTGCGGGCCCCCGTGGACGAGGACCGCCTGTCCCCACTGGTGGCAGCCGACTCGCTCCTGGAGCACGTGCGGGAGGACTTTGCCGGCCTCCTCCCCGAGGAGTTCATCAGCCTGTCCCCCCCGCACGAGGCCCTCGACTACCACTTCGGCCTCGAGGAGGGCGAGGGCATCAGAGACCTCTTCGACTGTGACTTTGGGGACCTCACTCCCCTGGATTTCTGA

Related Sequences

bmy_00557T0 Protein

Length: 346 aa      View alignments
>bmy_00557T0
LETDHQYLAESSGPARGRGRHPGKGVKSPGEKSRYETSLNLTTKRFLELLSRSADGVVDLNWAAEVLKVQKRRIYDITNVLEGIQLIAKKSKNHIQWLGSHAAVGIGGRLEGLTQDLQQLQESERQLDHLIHICTTQLRLLSEDADSQRLAYVTCQDLRSIADPAEQMVMVIKAPPETQLQAVDSSETFQISLKSKQGPIDVFLCPEESAGGISPGKTSSQGAASGEEDRAADPATTVPPPPSSSPPSSPATDPSQSLLSLEQEPLLSRMGSLRAPVDEDRLSPLVAADSLLEHVREDFAGLLPEEFISLSPPHEALDYHFGLEEGEGIRDLFDCDFGDLTPLDF*