Part of scaffold_9 (Scaffold)

For more information consult the page for scaffold_9 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ITCH ENSTTRG00000012426 (Bottlenosed dolphin)

Gene Details

itchy E3 ubiquitin protein ligase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011805, Bottlenosed dolphin)

Protein Percentage 80.48%
cDNA percentage 80.52%
Ka/Ks Ratio 0.29549 (Ka = 0.0214, Ks = 0.0726)

ITCH ENSBTAG00000000308 (Cow)

Gene Details

E3 ubiquitin-protein ligase Itchy homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000397, Cow)

Protein Percentage 96.21%
cDNA percentage 94.99%
Ka/Ks Ratio 0.17099 (Ka = 0.0249, Ks = 0.1456)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2139 bp    Location:2624455..2678689   Strand:+
>bmy_00566
GAGGAAGTAGTTGTGACTTTACAGCTTGTAGGTGACAAAGAACCAACAGAGACAATAGGAGATTTGTCAGTTTGTCTTGATGGGCTGCAGCTAGAGTCTGAAGTTGTTGCTAATGGTGAAACTACATGTTCAGAAAGTGCTTCACAGAATGATGATGGCTCCAGACCCAAGGATGAAACAAGAGTGAACACAAATGGATCAGACCACCCTGAGGATGCAGGGTCTGGTGAAAATAGGAGGGTCAATGGGAATAATTCTCCATCACTCTCAAATGGCGGTTTTAAACCTTCTAGGCCTCCAAGACCTTCACGACCACCTCCACCTACCCCACGTAGACCAGCATCTGTCAATGGCTCACCATCTGCCACTTCTGAAAGTGATGGCTCTAGTACAGGCTCTCTGCCACCAACGAATACAAATTCAAATACATCCGAAGGAGCAACTTCTGGATTAATAATTCCTCTTACTATATCTGGAGGTTCAGGCCCTAGGCCATTAAATCCTGTACCTCAAGCTCCCCTCCCACCCGGTTGGGAGCAGAGAGTGGACCAGCATGGACGAGTTTACTATGTAGATCATATTGAAAAAAGAACAACGTGGGATAGACCAGAACCTCTACCTCCTGGCTGGGAACGGCGGGTTGACAACATGGGACGTATTTATTATGTTGACCATTTCACAAGAACAACGACGTGGCAGAGGCCAACATTGGAATCCGTCCGGAACTATGAACAATGGCAGCTCCAACGTAGTCAGCTTCAAGGAGCTATGCAGCAATTTAACCAGAGGTTCATTTATGGGAATCAAGACTTGTTTGCTACATCACAAAATAAAGAATTTGATCCCCTGGGTCCCCTGCCACCTGGATGGGAGAAGAGAACGGACAGCAATGGTAGAGTATATTTTGTCAACCACAATACTCGTATTACACAATGGGAAGACCCCAGAAATCAAGGTCAATTAAATGAAAAGCCCTTACCTGAAGGCTGGGAAATGAGGTTCACGGTAGATGGAATTCCATATTTTGTGGACCACAATAGAAGAACAACCACCTATATAGATCCCCGCACTGGAAAATCTGCCTTAGACAATGGACCCCAGATAGCCTATGTACGGGACTTCAAGGCAAAGGTTCAGTATTTCCGGTTCTGGTGTCAGCAACTGGCCATGCCACAGCACATAAAGATTACAGTGACAAGAAAAACATTGTTTGAGGATTCCTTTCAGCAGATAATGAGCTTCAGTCCCCAAGATCTGCGAAGACGTTTGTGGGTGATTTTTCCAGGAGAAGAAGGTTTAGATTATGGAGGTGTAGCAAGAGAATGGTTCTTTCTTTTGTCACATGAGGTGTTGAACCCAATGTATTGCCTGTTTGAATATGCAGGGAAGGATAATTACTGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATATTTTCGTTTTATTGGCAGGTTTATTGCTATGGCTCTGTTCCATGGGAAATTCATAGACACAGGTTTTTCTTTGCCATTCTATAAGCGTATCTTGAACAAACCAGTTGGACTCAAGGATTTAGAATCTATTGATCCAGAATTTTACAATTCTCTCATCTGGGTTAAAGAAAACAATATTGAGGAATGTGGTTTGGAAATGTACTTTTCCGTCGATAAAGAAATTTTAGGTGAAATCAAGAGTCATGATTTGAAACCCAATGGTGGCAATATTCTTGTAACAGAAGAAAATAAAGAGGAATATATCAGAATGGTAGCTGAATGGAGGTTGTCTCGCGGTGTTGAAGAACAGACACAAGCTTTCTTTGAGGGCTTTAATGAAATTCTTCCCCAGCAGTATTTGCAGTACTTTGATGCAAAGGAATTAGAGGTTCTTTTATGTGGAATGCAAGAGATTGATTTGAATGACTGGCAAAGACATGCCATCTACCGTCATTACACTAGGACAAGCAAACAAATCATGTGGTTTTGGCAGTTTGTTAAAGAAATCGATAATGAGAAGAGAATGAGACTTTTGCAGTTTGTAACTGGAACCTGCCGATTGCCAGTTGGAGGATTTGCTGACCTCATGGGTATGTCTACAGGATCACTTTTCCTATACAGAAAATTGTTTATCACACTGCTGTTATATTAA

Related Sequences

bmy_00566T0 Protein

Length: 713 aa      View alignments
>bmy_00566T0
EEVVVTLQLVGDKEPTETIGDLSVCLDGLQLESEVVANGETTCSESASQNDDGSRPKDETRVNTNGSDHPEDAGSGENRRVNGNNSPSLSNGGFKPSRPPRPSRPPPPTPRRPASVNGSPSATSESDGSSTGSLPPTNTNSNTSEGATSGLIIPLTISGGSGPRPLNPVPQAPLPPGWEQRVDQHGRVYYVDHIEKRTTWDRPEPLPPGWERRVDNMGRIYYVDHFTRTTTWQRPTLESVRNYEQWQLQRSQLQGAMQQFNQRFIYGNQDLFATSQNKEFDPLGPLPPGWEKRTDSNGRVYFVNHNTRITQWEDPRNQGQLNEKPLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRTGKSALDNGPQIAYVRDFKAKVQYFRFWCQQLAMPQHIKITVTRKTLFEDSFQQIMSFSPQDLRRRLWVIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLKDLESIDPEFYNSLIWVKENNIEECGLEMYFSVDKEILGEIKSHDLKPNGGNILVTEENKEEYIRMVAEWRLSRGVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRHAIYRHYTRTSKQIMWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGMSTGSLFLYRKLFITLLLY*