Part of scaffold_9 (Scaffold)

For more information consult the page for scaffold_9 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PHF20 ENSTTRG00000017042 (Bottlenosed dolphin)

Gene Details

PHD finger protein 20

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016157, Bottlenosed dolphin)

Protein Percentage 98.88%
cDNA percentage 98.96%
Ka/Ks Ratio 0.2286 (Ka = 0.0052, Ks = 0.0228)

PHF20 ENSBTAG00000005571 (Cow)

Gene Details

PHD finger protein 20

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000007321, Cow)

Protein Percentage 94.86%
cDNA percentage 94.44%
Ka/Ks Ratio 0.17344 (Ka = 0.0261, Ks = 0.1507)

PHF20  (Minke Whale)

Gene Details

PHD finger protein 20

External Links

Gene match (Identifier: BACU015526, Minke Whale)

Protein Percentage 99.88%
cDNA percentage 99.71%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0068)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2406 bp    Location:3814817..3894289   Strand:+
>bmy_00596
ACTTACACTGTGAAATTTTATGATGGAGTAGTTCAGACTGTCAAACATATTCATGTCAAAGCTTTTTCGAAAGATCAGAATATTGTGGGTAATGCTAGGCCTAAAGAAACAGAACACAAAAGTCTTTCATCATCTCCTGATAAACGAGAGAAGTTTAAAGAGCAGAGAAAAGCCACAGCCAATGTGAAGAAAGACAAAGAGGACAAAGCCTTAAAGACAGAAAAGAGACCCAAACAGCCTGATAAAGAAGGAAAGTTAATCTGTTCTGAAAAGGGGAAGGTGTCAGAGAAGAGCCTTCCCAAGAACGAGAAGGAAGATAAGGAGAACATTTCAGAAAATGACAGAGAGTATTCTGGAGATGCTCAAGTGGATAAGAAACCTGAAAATGACATTGTGAAGAGTCCACAAGAAAGCTTGAGGGAGCCAAAAAGAAAGCGAGGCAGACCCCCTTCCATAGCTCCTACTGCCCAGGAAAAGTCAAAAAACTACTCGGAAAACACTGATAAAGACTTATCAAGGAGACGGTCCTCCAGGCTGTCCACTAATGGGACCCACGAGATCCTAGATCCTGACTTGGTTGTATCAGATTTGGTTGATACGGTTACTACTGATCCTTTGCAAAACACATCATCTGGTACCAAGGAGTCTGAAGAAGTAACAAATACTTGTAAGAAAACAGATGATTTTGTGACATCTAAAGCACCAGCTGTCGACCTAGATCACAAGTTTAGGTGCAAGGTTGTGGATTGTTTAAAATTTTTCCGCAAAGCCAAACTGTTGCACTATCACATGAAGTATTTCCACGGAATGGAGAAGTCACCAGAGCCAGAGGAGAACTCAGGAAAGAGGCATGTCCAGACGAGGGGCTCTTCAGCTTCAGACAAGGCCAGCCAGGAGAGCCTGACCAGGAAGCGGGTCTCGGCCAGTTCCCCAACTGCAAAAGACAAGGAGAAGAATAAAGAGAAGAAATTCAAAGAGTTTGTGAGGGTGAAGCCAAAGAAGAAAAAGAAAAAGAAAAAGAAAACCAAACCTGAATGCCCCTGCAATGAGGAGATCAGTGATGCCTCCCAGGAACCTTCTCCACCCAAGGCATTTGCTGTCACCAGGTGTGGGTCCTCACACAAGCCCGGGGTCCATATGAGCCCACAGCTCCATGGCTCAGAATCTGGAAACCACAAAGGGAAAGTGAAAATGTCCGAAGAAGATAATCTGAGTGACTCCTCCTCTGAGAGCTTTCTTTGGAGCGATGAGGAGTATGGCCAAGACGTTGATGTGACCACTAACCCAGATGAGGAACTTGATGGGGAGGACCGTTATGATTTTGAAGTGGTCCGCTGCATCTGTGAGGTTCAGGAGGAAAATGACTTCATGATTCAGTGTGAAGAGTGCCAGTGCTGGCAGCATGGGGTCTGCATGGGATTACTGGAAGAAAATGTGCCTGAGAAATACACCTGTTATGTTTGCCAAGACCCTCCAGGTCAGAGGCCTGGCTTCAAGTACTGGTATGACAAGGAGTGGTTGAGCAGGGGACATATGCATGGCCTGGCATTTTTAGAAGAGAACTATTCCCACCAGAATGCCAAGAAGATTGTGGCCACCCACCAGCTTCTCGGCGATGTGCAGAGAGTGATCGAGGTTCTGCATGGCCTGCAGCTCAAGATGAGCATCTTGCAAAGCCGGGAGCATCCTGATCTGCAGCTGTGGTGTCAGCCTTGGAAACAGCATCTGGCGGAGGGGAGATCTCATTCCAAACACATCCATGTCACTGAAGCCAAGAGCAGGGAGGAAGCCCCAAGCTATAGAACTTTGAACGGGGCGGTGGAGAAGCCTCTGCCCCTGCCCTTGCCCCGGTCTGTGGAGGAGTCATATATCACCAGCGAGCACTGCTACCAGAAGCCCCGCACCTACTACCCTGCTGTGGAACAGAAGCTGGTGGTGGAGACCCGGCGCTCTGCCCTTGACGATGCAGTCAACCCCCTCCACGAGAATGGTGACGATTCCCTCTCTCCGCGCCTGGGCTGGCCTCTAGAACAAGACAGGAGCAGAGGGGACAGTGACCCCAAACCCAGCTCCCCAAAGGTGAGGGAATATGTCTCCAAAAAGGTCCTACCTGAGGAAGCCCCCGCTCGGAAGCTGCTGGACAGAGGCGGAGAGGGGCTGCTGAGCTCCCAGCACCAGTGGCAGTTTAACCTGCTGACACACGTGGAGTCTCTTCAGGACGAAGTCACGCATAGGATGGACTCCATTGAGAAGGAGCTGGACGTGTTGGAGAGCTGGCTGGACTACACTGGGGAGCTGGAGCCCCCGGAGCCTCTGGCCAGGCTTCCGCAGCTCAAGCATTGCATCAAGCAGCTGCTGACGGACCTGGGCAAGGTGMAACAGATCGCACTCTGCTGCTCAACATGA

Related Sequences

bmy_00596T0 Protein

Length: 802 aa      View alignments
>bmy_00596T0
TYTVKFYDGVVQTVKHIHVKAFSKDQNIVGNARPKETEHKSLSSSPDKREKFKEQRKATANVKKDKEDKALKTEKRPKQPDKEGKLICSEKGKVSEKSLPKNEKEDKENISENDREYSGDAQVDKKPENDIVKSPQESLREPKRKRGRPPSIAPTAQEKSKNYSENTDKDLSRRRSSRLSTNGTHEILDPDLVVSDLVDTVTTDPLQNTSSGTKESEEVTNTCKKTDDFVTSKAPAVDLDHKFRCKVVDCLKFFRKAKLLHYHMKYFHGMEKSPEPEENSGKRHVQTRGSSASDKASQESLTRKRVSASSPTAKDKEKNKEKKFKEFVRVKPKKKKKKKKKTKPECPCNEEISDASQEPSPPKAFAVTRCGSSHKPGVHMSPQLHGSESGNHKGKVKMSEEDNLSDSSSESFLWSDEEYGQDVDVTTNPDEELDGEDRYDFEVVRCICEVQEENDFMIQCEECQCWQHGVCMGLLEENVPEKYTCYVCQDPPGQRPGFKYWYDKEWLSRGHMHGLAFLEENYSHQNAKKIVATHQLLGDVQRVIEVLHGLQLKMSILQSREHPDLQLWCQPWKQHLAEGRSHSKHIHVTEAKSREEAPSYRTLNGAVEKPLPLPLPRSVEESYITSEHCYQKPRTYYPAVEQKLVVETRRSALDDAVNPLHENGDDSLSPRLGWPLEQDRSRGDSDPKPSSPKVREYVSKKVLPEEAPARKLLDRGGEGLLSSQHQWQFNLLTHVESLQDEVTHRMDSIEKELDVLESWLDYTGELEPPEPLARLPQLKHCIKQLLTDLGKVXQIALCCST*