Sequence detailsbmy_00620 (Coding sequence)

Part of scaffold_10 (SequenceType object (1))

For more information consult the page for scaffold_10 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SMPXENSTTRG00000007830 (Bottlenosed dolphin)

Gene Details

small muscle protein, X-linked

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007398, Bottlenosed dolphin)

Protein Percentage 51.14%
cDNA percentage 56.44%
Ka/Ks Ratio 0.93622 (Ka = 0.2141, Ks = 0.2287)

SMPXENSBTAG00000015204 (Cow)

Gene Details

Small muscular protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000020229, Cow)

Protein Percentage 84.88%
cDNA percentage 86.82%
Ka/Ks Ratio 0.34889 (Ka = 0.1023, Ks = 0.2933)

Additional orthologs identified in other species via the OPTIC pipeline.

SMPX (Human)   Smpx (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 294 bp    Location:2640968..2623177   Strand:-
Raw sequence 
>bmy_00620
ATGTCCCCCAGGTCTCTGTGCAGAACAGACACGTGCACAGCGAGCAGGGAGCATCGCAGTAGTAAGAACGCGGCAAATATCAATATCCCAATGGGAGCCTTTCGGCCAGGAGCTGGGCAACCCCCCAGAAGAAAAGAATGTACTCCGGAAACGGAGGAGGGTGCTCTTCCCACTTTGGATGAGGAGAAGAAGCCAATTCCAGGAGCTAAGAAACTTCCAGGACCTGCAGTCAACCTATCTGAGATCCAGAATATTAAAAGTGAACTGAAGTACGTCCCCAAAGCTGAACAGTAG

Related Sequences

bmy_00620T0 SequenceType object (3)

Length: 98 aa      View alignments
>bmy_00620T0
MSPRSLCRTDTCTASREHRSSKNAANINIPMGAFRPGAGQPPRRKECTPETEEGALPTLDEEKKPIPGAKKLPGPAVNLSEIQNIKSELKYVPKAEQ*