Sequence detailsbmy_00645 (Coding sequence)

Part of scaffold_11 (SequenceType object (1))

For more information consult the page for scaffold_11 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RPUSD2ENSTTRG00000010585 (Bottlenosed dolphin)

Gene Details

RNA pseudouridylate synthase domain containing 2

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000010034, Bottlenosed dolphin)

Protein Percentage 97.05%
cDNA percentage 98.1%
Ka/Ks Ratio 0.43071 (Ka = 0.0143, Ks = 0.0331)

RPUSD2 (Minke Whale)

Gene Details

RNA pseudouridylate synthase domain containing 2

External Links

Gene match (Identifier: BACU008530, Minke Whale)

Protein Percentage 99.03%
cDNA percentage 99.29%
Ka/Ks Ratio 0.33116 (Ka = 0.0046, Ks = 0.0138)

Additional orthologs identified in other species via the OPTIC pipeline.

RPUSD2 (Cow)   RPUSD2 (Human)   Rpusd2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1659 bp    Location:549130..553115   Strand:+
Raw sequence 
>bmy_00645
ATGTGGCTGGGCGGCCGCCTGTGGCTCCAGGTTTTTGGGCAAGTGTGCTCCAACCTCCGGCGCCTCACCTTTGACAGGACTTGGGGTGGCCGTAGGGGCCCCATGGCGGAAACACTCTCGACCGGGGCCGAGGCAGCGAGCGGGCTGGGGGCTCCGGCTCAGCAAAATGGAGATGCGGGTGGCGACGCGAGGGGTGAGCAGCCCCCAGGGCGCCCGGAGCCAGCGGGCCCAGGAGTGGAGCCGGCCCCGGGGGACGCGAAGCAGGCCGCAGGGAGCGGGGAGCAGGCCGCGACTGCAGCCCCGGGCCCCGGCAAGCGGAAGAAGCGGCGGGGCGCAACCGGGGAGCGCGTCGTGCCGCCCCCGAAGAAGCGGCGGGCAGGCGTTAGCTTCGGCGATGAACACTTTGCCGAGACCAGCTACTACTTTGAGGGCGGCCTGCGCAAAGTGCGGCCCTATTACTTTGACTTCCGAACTTACTGCAAAGGCCGCTGGGTGGGCCACAGCTTGCTGCACGTCTTCAGCACCGAGTTCCGAGCCCAGCCTCTTGCCTACTACGAGGCCGCGGTCAGGGCAGGGCGCCTGCACCTCAACGAGGAGCCAGTACAGGACCTCAGCGTTGTGCTCAAGGACAATGACTTCTTACGGAACACAGTGCACAGGCATGAGCCACCAGTTACAGCAGAACCCGTCCGCCTGCTAGCAGAGAACGAAGATGTGGTGGTTGTAGACAAGCCTTCTTCCATTCCTGTCCACCCCTGTGGCCGCTTCCGACACAACACGGTCATCTTCATCCTGGGCAAGGAGCACCAACTCAAGGAGCTACACCCATTGCATCGGCTTGACCGCCTTACCTCTGGGGTCCTTATGTTTGCCAAGACAGCAGCCGTCTCGGAGAGAATTCATGAACAGGTTCGGGACCGGCAGCTGGAGAAGGAGTATGTGTGCCGGGTGGAGGGGGAGTTCCCTGCCGAGGAAGTAACCTGCAAGGAACCCATCTTGGTGGTGTCCTACAAGGTAGGGGTATGCCGTGTAGATCCTCGGGGCAAGCCCTGTGAGACAGTGTTCCAGAGACTGAGCTACAATGGCCACTCCAGTGTGGTACGATGCCGGCCACTCACAGGCCGCACCCACCAGATCCGAGTCCACCTCCAGTTCCTGGGTCACCCCATCCTCAATGACCCCATCTACAACTCAATCGCCTGGGGCCCCTCCCGAGGCCGAGGTGGCCACATTCCAAAGACAGATGAGGAACTACTGCGGGACCTTGTGGCAGAGCACCAGGCCAAACAGAGTCTGGATGTGCTAGATCTCTGTGAGGGTGACCTGTCTCCAGGACTCCCAGACTCTACAGCCCCTTCCTCAGAGCTGGGCAAAGACTGCCTAGGAGAGTTGGCTGCATCTGCCCAGAAGATGGATGGAGCAGTTGAGGCAGGCCCTCAGGATCTGGACACAGTGTCCTTGGCATCAGGGAAGGCAACGGAAATCGATGTCGTGAATCAAGAGACAGACCCACTGTGTGCAGAGTGCCGGCTAGTGCGACAGGACCCCTTGCCCCAAGACCTTGTGATGTTCCTGCATGCCCTGTGCTATAAAGGGCCAGGCTTCGAGTACTTTTCACCAGTGCCTGCCTGGGCACAGGATGACTGGCAAGAGGACTGA

Related Sequences

bmy_00645T0 SequenceType object (3)

Length: 553 aa      
>bmy_00645T0
MWLGGRLWLQVFGQVCSNLRRLTFDRTWGGRRGPMAETLSTGAEAASGLGAPAQQNGDAGGDARGEQPPGRPEPAGPGVEPAPGDAKQAAGSGEQAATAAPGPGKRKKRRGATGERVVPPPKKRRAGVSFGDEHFAETSYYFEGGLRKVRPYYFDFRTYCKGRWVGHSLLHVFSTEFRAQPLAYYEAAVRAGRLHLNEEPVQDLSVVLKDNDFLRNTVHRHEPPVTAEPVRLLAENEDVVVVDKPSSIPVHPCGRFRHNTVIFILGKEHQLKELHPLHRLDRLTSGVLMFAKTAAVSERIHEQVRDRQLEKEYVCRVEGEFPAEEVTCKEPILVVSYKVGVCRVDPRGKPCETVFQRLSYNGHSSVVRCRPLTGRTHQIRVHLQFLGHPILNDPIYNSIAWGPSRGRGGHIPKTDEELLRDLVAEHQAKQSLDVLDLCEGDLSPGLPDSTAPSSELGKDCLGELAASAQKMDGAVEAGPQDLDTVSLASGKATEIDVVNQETDPLCAECRLVRQDPLPQDLVMFLHALCYKGPGFEYFSPVPAWAQDDWQED*